Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03707 | ATGGTCGTCCGCAAGCCCGCACACCTCTTCCTCGACGAGCTTGAAATCGAGTACGACGAGCAAGAAGACTACGTAGTCATCAAACACGCGGCTCTCTTCACCTCCACCATCATGAGCAAGCTCTTAGCCAGGCCAAACGTGAAGCTCTTCAACGCAGTAGCAGCCGAGGACTTAATCATCAAGGGAGGTAGAGTCAGTGGCGTTGTAACTAACTGGGCTTTAGTCGCAATGAACCACGACACACAATCCTGCATGGACCCGAATGTAATGGAGGCTAAAGTGGTTGTGAGTTCATGTGGACACGATGGACCCATGGGTGCTACAGGAGTGAAAAGGCTCAGAAGCGTTGGATTGATTGAGAGTGTTCCTGGGATGAAGGCTCTTGACATGAACGCTGCTGAAGATGCGATTGTGAAGTTGACTAGAGAGATTGTTCCTGGTATGATTGTTACAGGAATGGAAGTTGCAGAGATCGATGGATCTCCAAGAATGGGGCCGACGTTTGGGGCTATGATGATATCTGGACAGAAGGCTGCTCATCTGGCTTTGAGGGCTTTAGGGCTTCCGAATGCTTTGGATGGGACAAGTGTGGGAAGTGTTCATCCAGAGATGATTCTTGCTGCTGTTGATTCTGGTGAGACTGTGGATGCCTAA | 654 | 49.85 | MVVRKPAHLFLDELEIEYDEQEDYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIIKGGRVSGVVTNWALVAMNHDTQSCMDPNVMEAKVVVSSCGHDGPMGATGVKRLRSVGLIESVPGMKALDMNAAEDAIVKLTREIVPGMIVTGMEVAEIDGSPRMGPTFGAMMISGQKAAHLALRALGLPNALDGTSVGSVHPEMILAAVDSGETVDA | 217 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03707 | 217 | Pfam | Thi4 family | 1 | 168 | - | - | |
| Lssa7g03707 | 217 | PANTHER | THIAMINE THIAZOLE SYNTHASE | 1 | 216 | - | - | |
| Lssa7g03707 | 217 | Gene3D | - | 1 | 186 | IPR036188 | - | |
| Lssa7g03707 | 217 | NCBIfam | sulfide-dependent adenosine diphosphate thiazole synthase | 1 | 185 | IPR002922 | - | |
| Lssa7g03707 | 217 | SUPERFAMILY | FAD-NAD(P)-binding domain | 4 | 179 | IPR036188 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03707 | K03146 | cysteine-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.60] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 127172 | Lssa5g00172 | Lssa7g03707 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3967514 | Lssa | Lssa5g00172 | Lssa-Chr5:9848204 | Lssa7g03707 | Lssa-Chr7:196274400 |