AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03737 ATGGCGCCCCCTTCTTCTCCATCCACGTTCACCTGCAAAAACCTCTTCGCAATAACCCTAATCATCGTCTTCCTCCTTTCTTGTTGTACCCGCAGTCCACGAGTACAAGCCCTTAAAGCACCAATCAGACCACAAGACATACTCCCACTTTTACCCCGCCAAGTTTCATGGCCTATTCTCAACACTTTCCGAGGCGCCGCCGATCTTCTGCCGAGCTTCGTCGGAGCAGCGGCTATTGCAAATAATTCGTTGTTGCATTGGAAAGGGTCTTGCTTTTATGAGAACACTGCGTGGTTAGAGCTTCATAACAAAAGTGGTAGTGAATTTGGTGGAGGCACTCTTCATATTAAGGTAAGCAAGGCACACAGTTGGACATGTATGGATATTTACGTCTTTGCCACTCCATATCGTGTGACATGGGACTACTATTTCATATCCCGTGACCACACCCTTGAGTTTGATGAGTGGGGAGGGAAAGCCGAGTATGAATACGTAAAACGTAAAGGAGTTTCAATTTTCCTGATGGAAGCTGGGATGATAGGAACCCTAGAAGCATTATGGGAGGTTTTCCCCCTTTTTACAAACACTGGATGGGGGGAAACTTCTAATCTTGCTTTTCTCAAAAAACATATGGGAGCTAATTTTGAAGAAAGATCCGGGCCATTTGTAACAAATGTTACGGTTGATGATATACACTCGGGTGACTTTCTTGCAATATCAAAGATCCGTGGGCGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGGCGTATGCGGGTCATTCTGCTGTTTGCTTGAGGGACCCGGATGGGAATCTATGGGTCGGGGAATCTGGACATGAAGATGATGAGGGTCAAGATGTAATTGCTTTATTGCCATGGGACGAATGGTGGGAGTTTGAGGTGACAAAAGATGATTCTAATCCTCATATTGCATTGCTTCCTTTACATCCCGATCTTCGCTCAAAGTTTAATGAGACTGCAGCATGGGAGTATGCACAAAGCATGATAGGGTTGCCATATGGTTATCATAATTTAATATTTAGCTGGATAGACACCATCAGCGATAACTACCCACCACCGTTGGATGCTAATCTGGTTGCTTCAGTTATGACCGTGTGGAATCAACTGCAGCCTGCATATGCAGCTAATATGTGGAACGAAGCCTTGAATAAGCGGCTTGGTACTAAGGGTCTTGATCTTCCGGATATTTTAGTCGAAGTTGAAAAGCGTGGTTCGTCTTTTGCTGAATTATTGACTATTCCCGAACAAGATGACTGGGTTTATGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTTGTCCTTGAAATGTATAAGGAAGCCGGACTTTTTGGGAATCTTGCAAGTGAAATCCAAGTTACCGAGTTCACAATAAAGGATGCATACATGCTAAACTTTTTTGAAGACGATTTGAGTCGTTTGCCAAAGTGGTGTAACGAAGGGGACACAGTAGAGCTTCCATTTTGTCAAATCAAAGGCAAGTATCGAATGGAACTTCCCGGATACAATACTATGAATCCGTACCCTTATATGACCGAAAACTGCCCATCACTACCCCCGGACTATTTTAGGCCGGAATACTGCTAA 1614 44.42 MAPPSSPSTFTCKNLFAITLIIVFLLSCCTRSPRVQALKAPIRPQDILPLLPRQVSWPILNTFRGAADLLPSFVGAAAIANNSLLHWKGSCFYENTAWLELHNKSGSEFGGGTLHIKVSKAHSWTCMDIYVFATPYRVTWDYYFISRDHTLEFDEWGGKAEYEYVKRKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGETSNLAFLKKHMGANFEERSGPFVTNVTVDDIHSGDFLAISKIRGRWGGFETLEKWVSGAYAGHSAVCLRDPDGNLWVGESGHEDDEGQDVIALLPWDEWWEFEVTKDDSNPHIALLPLHPDLRSKFNETAAWEYAQSMIGLPYGYHNLIFSWIDTISDNYPPPLDANLVASVMTVWNQLQPAYAANMWNEALNKRLGTKGLDLPDILVEVEKRGSSFAELLTIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGNLASEIQVTEFTIKDAYMLNFFEDDLSRLPKWCNEGDTVELPFCQIKGKYRMELPGYNTMNPYPYMTENCPSLPPDYFRPEYC 537
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03737 537 PANTHER OS01G0793500 PROTEIN 16 537 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03737 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
127166 Lssa5g00150 Lssa7g03737
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3917455 Lssa Lssa4g00292 Lssa-Chr4:12482278 Lssa7g03737 Lssa-Chr7:196893544
3933069 Lssa Lssa7g03737 Lssa-Chr7:196893544 Lssa8g05486 Lssa-Chr8:313758926
3967511 Lssa Lssa5g00150 Lssa-Chr5:7861537 Lssa7g03737 Lssa-Chr7:196893544