AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03742 ATGGGTTGGAGGAATGAAGAAGATGAAAGAAGATCACCATCATCATCGCCACTTGTAAACGATGCGTTGCTTTTAACAACCATGTGTATCATTGGTCTCTCTGTTGATGTTCACATCAAGGATGGGTCCATCTATTCTGGAATCTTTCACACTGCCTGTGTTGACGACCGTTATGCTATTGTGTTGAAGCAAGCAAGGATGATCAAGAAGGGGAGCTGTGATTCAAATGTGGCAAACGAGGGGGTGATAGGAACACTTATAATTCAATCAGAGGATCTTGTCCAAGTGGTTGCTAAGAGAGTAGTGCTTCCAGCAGATGGTTTTGCTGGACATGAGACAGGGGATGATACAGGGGCAGTTGCATGCTCTTTCCCTTCTAATGGAACTCAACTGACTGAAGGAAATAAAACAATGTCCACAAAGTCAAACGTTGACCAACCTCAAGCTAATCAAACAAAATGCTTGTCTGGATCTGACAACGGGTTTCCTACTCACTCAACCAATACTCTTGAAGTCAATAAAAACACAGATGCTAAAGTTTCAACAAAGAAAGAAGAAGCTTTGAAGGATTCAGATGATAACAGAAAGAACAAAAGTTATCAAAGTAACAACCAAAAGGAATCAATTGTGAGTTCATCATCAACTCCAACCGAAACCATCACTTCAAAAATCCCAAATTCTAATCAAACTGCTAAGGAATTTAAACTTAATCCAGGAGCAAAAATATTTTCTCCTTCATTTCCAAATAAAAGATCAGCAACTCCTCCGGTGATACCCACCGGAGCAAATCTTGCATACGTTCAGGACGGTTATCCGGCGGTACAAGTGGCGGCACCACCGCCGGAAGTTGAAATCGGCCCGTATGCTCCTCGTTCTTTACCGGTTAAGTTTTTTCCTTATGGTGGAAATGGAGGTGGCGATGTACAACAACATCATCCTCCACCTATTGTTGGATATATGACAAATAGAGGTCAACCGGTTAGATATAGTAATCAATATCATCCGGTTCAAACTACACCAACCTATGTTCAACCAGCCACTCAAAATGTAATGGTTGGAAGATTTGGACCGGTTGTCTATGTTCATCCGGTCTCTCAAGACATGGTCCCGAGCACGACGGGTTTCTCTCAAGTGAATACATGCTCTATCTTGACTCCACACCAACTACATGTCCCTAAACACCAAGGAAGTGCAGCAGCCCAAGCATTGCAGCTCTGTGCAACACCACCATTTATAGCCGCCGCCGCTGCCGGTGGTGGTGGTCAAACTCCGTTTATGTTACCGGGCCACCACATTCCCATTTCACAACCGCCTTACCCAATCATCCGCCCAATGCCACTCCCTGGATCCAATGCTTTTTTAGTATCAAAGTTTTCTTGA 1380 43.62 MGWRNEEDERRSPSSSPLVNDALLLTTMCIIGLSVDVHIKDGSIYSGIFHTACVDDRYAIVLKQARMIKKGSCDSNVANEGVIGTLIIQSEDLVQVVAKRVVLPADGFAGHETGDDTGAVACSFPSNGTQLTEGNKTMSTKSNVDQPQANQTKCLSGSDNGFPTHSTNTLEVNKNTDAKVSTKKEEALKDSDDNRKNKSYQSNNQKESIVSSSSTPTETITSKIPNSNQTAKEFKLNPGAKIFSPSFPNKRSATPPVIPTGANLAYVQDGYPAVQVAAPPPEVEIGPYAPRSLPVKFFPYGGNGGGDVQQHHPPPIVGYMTNRGQPVRYSNQYHPVQTTPTYVQPATQNVMVGRFGPVVYVHPVSQDMVPSTTGFSQVNTCSILTPHQLHVPKHQGSAAAQALQLCATPPFIAAAAAGGGGQTPFMLPGHHIPISQPPYPIIRPMPLPGSNAFLVSKFS 459
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03742 459 Pfam Ataxin 2 SM domain 20 99 IPR025852 -
Lssa7g03742 459 MobiDBLite consensus disorder prediction 131 230 - -
Lssa7g03742 459 PANTHER ATAXIN 2-RELATED 134 428 IPR045117 GO:0003723(InterPro)|GO:0003729(PANTHER)|GO:0010494(PANTHER)|GO:0034063(PANTHER)
Lssa7g03742 459 MobiDBLite consensus disorder prediction 201 230 - -
Lssa7g03742 459 MobiDBLite consensus disorder prediction 131 176 - -
Lssa7g03742 459 MobiDBLite consensus disorder prediction 177 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03742 - -