AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03743 ATGATGAACCCAGTCAACCAAGAAGTAAGACCCGAAGCATCACTAATGATTCCGGAAAAACGAAAACGTGGGCGCCCACGAAAGGATCCGAGTGAAAGACGGGCAGCAAAAGCCCGTTCACAAGCTGCCCGAATGCAACCTGGTTTTGCCCAACATCACACCACCACCCCTCGACTCGATCCAATCCATGATCCAACCCAAGTCATGATTGGTCAAACCGTAACCGGTGTAGTTGAAGCCACTTTTGAAGCCGGTTACCTTCTTGCTGTCAGAATCGGTAACTCAAATATAACCCTAAGAGGTGCAGTCTTCAAGCCAGGTCACACCGCTCCCATAACACCCGATAATGACGTGGCGCCACATGTCGAAATGATCAAAAGAACCCAAGTTCCTTTTCCAGAAATGCAACCTCCAATTCGCAGGAGAAAAAGACGATCAAAAGAAAAGAACATGCAGCTCGTTACTTATGTTCCCAATGGTTCCCCTGATCAAACACTCCCAAACTCACCTTCTAAAAATTACGTTTTTACCCCTGGTAGAGGAAATGTGACCCCGGTTGTTCTTCAACCAAACGGGCCATTACCGAATCAACCGCCACCTCATTTGCGGGCCACACAAGGGAAACCGGTTCACTCGGTTTTGCCATTGGCGGTATACCCGCCGAACGGGTCAACGAGTCAAGCTTCTGAGTCGCAGACAAGCTCCCATTTTACAGGGTCTGGAAATGAAAATGTTTCGGTCAAACAAGGTGTGACAGATGGTCAACAAGTGGAAGGAAGTAGTAAGTCAACTGTTCGTCAACCAGATCGGGTTGTGAAAATGGAAACGGATATTGGTGACATGAATGAGCCTCTTTTTGTTGAACCGTTGCAGACACGACACTCGGTTCACCATTTTCAACCCGCACCCGTGATGGGACCCGGACCCGGACCCGGACCCGGACCTGTTATGCATACGGGGACCACTGGGAGAATGACCGAACTTTTACAGGCTGTTCAGCAGAATATGGGAGATGACCAGGCTCCTCGAAACGGACATCCAAGTGCAAGTTTTATGGTTAACAGAAACAGTAACAGAGATGAAGAAACTAACTGA 1095 48.58 MMNPVNQEVRPEASLMIPEKRKRGRPRKDPSERRAAKARSQAARMQPGFAQHHTTTPRLDPIHDPTQVMIGQTVTGVVEATFEAGYLLAVRIGNSNITLRGAVFKPGHTAPITPDNDVAPHVEMIKRTQVPFPEMQPPIRRRKRRSKEKNMQLVTYVPNGSPDQTLPNSPSKNYVFTPGRGNVTPVVLQPNGPLPNQPPPHLRATQGKPVHSVLPLAVYPPNGSTSQASESQTSSHFTGSGNENVSVKQGVTDGQQVEGSSKSTVRQPDRVVKMETDIGDMNEPLFVEPLQTRHSVHHFQPAPVMGPGPGPGPGPVMHTGTTGRMTELLQAVQQNMGDDQAPRNGHPSASFMVNRNSNRDEETN 364
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03743 364 MobiDBLite consensus disorder prediction 336 364 - -
Lssa7g03743 364 MobiDBLite consensus disorder prediction 1 63 - -
Lssa7g03743 364 MobiDBLite consensus disorder prediction 336 358 - -
Lssa7g03743 364 MobiDBLite consensus disorder prediction 214 266 - -
Lssa7g03743 364 MobiDBLite consensus disorder prediction 219 266 - -
Lssa7g03743 364 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 2 358 IPR045881 -
Lssa7g03743 364 MobiDBLite consensus disorder prediction 14 39 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03743 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3909161 Lssa Lssa1g04368 Lssa-Chr1:235567922 Lssa7g03743 Lssa-Chr7:196953175