AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03745 ATGGTGGATTTTGAAGCACCTTCATTCTCTTTAGGGCTTGATTATGACCTACTCGATTCAGAGCCCCAAATCACTTCTGTAAGTGAAGATGATGATTATGAAACTCTAATTGTCGATGATTCGGAGCCTGAATATTCGGATCCTCCTCCGAAGTCGAAGCGCCTCCAGCGTGTACTTACCGACGATGTGACAACATCATCAACGGTTTCAGCCAATCCTGAGGTGGAGTTGCGTTCCAGTGCGGTTGTTGATGATGAAGATGATAACGTGTTCTGTTCAAAGGAGGATATGCGTACTGATGAACATCAGCATACACAAAACCATGCTCTTTCCACCAGTTCAAAGTTACCAAACACGCCAGGAGTTTTGACTAGTCAACCAGGAAACAAAAGTCAAACTTTCCGTCGGAGACGACTTCTGTTGACTGTTTCTGACTCTGATTCTGATGATCCTTCTGTCAGTGACAATGTTAATAATAACAAATGTAACATATCAGAATCAATTGATTTATCAACTACAGAAAGAGAAAGTCCATGTGAAGATTTCAAATCAGAGAAAAGTTCATTAAATTTTGATGACTCTCTTCCTCCTGCTGTTCATTACTTTTTTCATGATGATTTAAGGATCCAAGAGCTTGTTCAAAGTCGCCTTCCTAATTTTTTTCCTCTGTGTAAAATTTCAAATAGAGAGCTTGAGCAACCCAGCACATCAGAAATCGATTACATGGGTCAATTTAAGTGTGGTGCAAGCTCAAAACAAGGTGTTAGAAATATTAAAGACAAGAAAAGCTCAAAAAGTAGGAGTAAAAATTCAAGAAAAGAGAATGTTGAAGAGACATCACAAGGTTGGGTGAACCCAAAGCTTTGTGTTGATAACAAGATTATAACAAAAGACACTCCTAAAAGAAAGACTCATGCAGCTCAACAATCTGCTGGATATTGGGTAACAGGTCAAGATGGAAAAAGGGTTTATGTTGGTAAAAGGGGTCAGGAGCTGACTGGACGAGTTGCTTACATGCAGTACAAAAAGGAGAGTGGATCATGGTTTAAAAAGGCAAAGAGGAAATCTGCTAAGAAGAATAAATGA 1086 39.23 MVDFEAPSFSLGLDYDLLDSEPQITSVSEDDDYETLIVDDSEPEYSDPPPKSKRLQRVLTDDVTTSSTVSANPEVELRSSAVVDDEDDNVFCSKEDMRTDEHQHTQNHALSTSSKLPNTPGVLTSQPGNKSQTFRRRRLLLTVSDSDSDDPSVSDNVNNNKCNISESIDLSTTERESPCEDFKSEKSSLNFDDSLPPAVHYFFHDDLRIQELVQSRLPNFFPLCKISNRELEQPSTSEIDYMGQFKCGASSKQGVRNIKDKKSSKSRSKNSRKENVEETSQGWVNPKLCVDNKIITKDTPKRKTHAAQQSAGYWVTGQDGKRVYVGKRGQELTGRVAYMQYKKESGSWFKKAKRKSAKKNK 361
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03745 361 MobiDBLite consensus disorder prediction 59 75 - -
Lssa7g03745 361 MobiDBLite consensus disorder prediction 39 135 - -
Lssa7g03745 361 MobiDBLite consensus disorder prediction 79 105 - -
Lssa7g03745 361 MobiDBLite consensus disorder prediction 44 58 - -
Lssa7g03745 361 MobiDBLite consensus disorder prediction 252 280 - -
Lssa7g03745 361 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 137 - -
Lssa7g03745 361 MobiDBLite consensus disorder prediction 106 135 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03745 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3933073 Lssa Lssa7g03745 Lssa-Chr7:197013747 Lssa9g03431 Lssa-Chr9:167550920