Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03770 | ATGAATAGTAATCCAGCTACGCCGATGAACGCAAACGCTCCGTCGTCAAGCTCCGGTGGCGCTGGATCCCCTGATTCAACTGCTCCAAGGAGAAATTCGAAACGACCTAAATATTCTAGGTTTACACAGCAGGAACTTCCAGCATGCAAGCCAATTCTTACTCCAAAATGGGTGATTTCAGCTTTCATGCTTGTAACCATTGTCTTCATACCAATAGGACTTGCTTCCCTCTTTGCTTCTCGTGATGTAGTTGAAATCATTGACCGATACGATAATGCCTGCGTACAAGGGTCAAAAAGTCAAAAGGTCCAATATATACAATCCAATGCAAGTAAGACCTGCACGAGAACCTTGACAGTCACAAAGCGTATGAAGCAGCCTATATACGTGTACTACCAACTCGACAATTACTACCAGAATCATCGGAGGTATGTGAAGAGCCGAAGTGATCAGCAATTAAGAAACCGTGGTGATGAAAATGACACAAGTTCATGTAAGCCCGAACATAATGCAAATGGGATGCCAATTGTGCCATGTGGGCTTGTAGCATGGAGTTTATTCAATGACACATATGCATTCTCCATCAGCAACAACCAATCATTACCCGTAAACAAGAGACATATTTCATGGAAAAGTGACAGAGAGGACAAATTTGGCAGTGATGTTTTCCCAAAAAACTTCCAAAATGGAAGTCTCATTGGTGGTGCACATCTCAACGAGTCCATACCATTAAGTGAGCAGGAAGACCTTATTGTGTGGATGAGAACTGCAGCTCTCCCAACTTTTAGAAAATTGTATGGAAAAATAGAAGTGGATATTCAAGCAGGAGAAACTATAACTGTTGTATTAGAGAACAACTACAACACTTATAGTTTTAGTGGCAAGAAGAAACTTGTGCTTTCAACCACAAGTTGGCTTGGAGGAAAGAATAACTTTATTGGCATCGCGTATCTTGCTGTTGGTGGATTATGCTTCATACTAGCTACAACTTTCACCCTCATATATTTAGTTAAACCAAGGCATCTTGGAGATCCGAATTATTTGTCATGGAACAGAAACCCAGGTGGTCATTGA | 1074 | 41.34 | MNSNPATPMNANAPSSSSGGAGSPDSTAPRRNSKRPKYSRFTQQELPACKPILTPKWVISAFMLVTIVFIPIGLASLFASRDVVEIIDRYDNACVQGSKSQKVQYIQSNASKTCTRTLTVTKRMKQPIYVYYQLDNYYQNHRRYVKSRSDQQLRNRGDENDTSSCKPEHNANGMPIVPCGLVAWSLFNDTYAFSISNNQSLPVNKRHISWKSDREDKFGSDVFPKNFQNGSLIGGAHLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEVDIQAGETITVVLENNYNTYSFSGKKKLVLSTTSWLGGKNNFIGIAYLAVGGLCFILATTFTLIYLVKPRHLGDPNYLSWNRNPGGH | 357 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03770 | 357 | MobiDBLite | consensus disorder prediction | 147 | 169 | - | - | |
| Lssa7g03770 | 357 | PIRSF | Lem3-Cdc50 | 7 | 353 | IPR005045 | GO:0016020(InterPro) | |
| Lssa7g03770 | 357 | Pfam | LEM3 (ligand-effect modulator 3) family - CDC50 family | 77 | 340 | IPR005045 | GO:0016020(InterPro) | |
| Lssa7g03770 | 357 | MobiDBLite | consensus disorder prediction | 147 | 165 | - | - | |
| Lssa7g03770 | 357 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Lssa7g03770 | 357 | PANTHER | CELL CYCLE CONTROL PROTEIN 50 | 29 | 349 | IPR005045 | GO:0005783(PANTHER)|GO:0005794(PANTHER)|GO:0005886(PANTHER)|GO:0016020(InterPro) | |
| Lssa7g03770 | 357 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03770 | K26935 | cell cycle control protein 50 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:117199184 | Lssa7g03770 | Lssa-Chr7:198590181 | dispersed | |
| Lssa | Lssa-Chr7:198590181 | Lssa8g05485 | Lssa-Chr8:313757406 | dispersed |