Gene detail

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Gene ID

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03781	ATGGCTTTCTCGTCTCTTCTCCGATCGACCAACCCACCACCTGTTCTTGAAGCATCCCGTCAATCACTCTCTGCCCCTTCATTTTCTAGCCGATCACAGGTGTCATCGGTGAAGCTTCAGTCCACCTTATTTGGTGCTTCCGTTTCCGGAGAATCTTCTTCTTTACAGATATCTCACGCACGCTGCATCAATCCAATCAAAGCCACAGCCACTGAGACGCCTCCAACTGTTCCAAAGTCCAGTACCAGTGGCAAGACCAAGGTCGGAATTAATGGTTTTGGAAGAATTGGAAGGTTGGTATTGAGAATAGCAACGTTTAGAGATGACATTGAGGTTGTTGCAGTCAACGACCCTTTTATTGATGCCAAATACATGGCTTACATGTTGAAGTATGATTCTACTCATGGTCTTTTTCAAGGAACCATCAATGTTGTTGATGAATCCACTTTGGAAATCAATGGGAAGCAAATAAAAGTAACCAGCCAAAGAGACCCTGCAACAATTCCATGGGGTGATTTTGGAGCTGACTATGTTGTAGAATCTTCTGGTGTTTTTACAACACTTGATACTGCTTCAGCACACAAGAAGGGTGGTGCCAAGAAGGTGGTGATCTCAGCTCCATCAGCTGATGCCCCTATGTTTGTTGTAGGGGTAAATGAGTCCACATACAAACCAAACATGGATATTGTATCGAATGCAAGCTGCACCACTAACTGCTTGGCTCCTTTGGCTAAGGTGGTTCATGAGGAGTTTGGTATCATTGAAGGTTTGATGACAACTGTACACGCAACCACAGCTACACAAAAAACCGTTGATGGACCTTCAATGAAGGATTGGCGTGGAGGACGTGGTGCTGCACAAAACATCATCCCCAGTTCCACTGGTGCTGCCAAGGCTGTGGGGAAGGTGTTGCCAGAGCTAAACGGAAAGCTTACTGGAATGGCTTTTAGGGTTCCAACAGCGAATGTTTCTGTTGTGGATTTAACTTGTCGACTTGAGAAGAAAGCTTCTTATGAAGATGTGAAAGCCGCTATAAAGTATGCCTCTGAGGGTCCCATGCAAGGAATTCTCGGGTACACCGATGAAGATGTTGTGTCCAATGATTTCGTTGGTGATTCCAGGTCAAGTATTTTTGATGCGAAAGCGGGGATAGGGCTAAGCACGTCATTTGTGAAGTTGGTGTCATGGTATGACAACGAATGGGGTTACAGTAACCGGGTCTTGGACCTGATAGAGCATATGGCGTTGGTGGCAGCCGTTTCCACCTGA	1269	45.78	MAFSSLLRSTNPPPVLEASRQSLSAPSFSSRSQVSSVKLQSTLFGASVSGESSSLQISHARCINPIKATATETPPTVPKSSTSGKTKVGINGFGRIGRLVLRIATFRDDIEVVAVNDPFIDAKYMAYMLKYDSTHGLFQGTINVVDESTLEINGKQIKVTSQRDPATIPWGDFGADYVVESSGVFTTLDTASAHKKGGAKKVVISAPSADAPMFVVGVNESTYKPNMDIVSNASCTTNCLAPLAKVVHEEFGIIEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVVDLTCRLEKKASYEDVKAAIKYASEGPMQGILGYTDEDVVSNDFVGDSRSSIFDAKAGIGLSTSFVKLVSWYDNEWGYSNRVLDLIEHMALVAAVST	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03781	422	Gene3D	-	87	414	-	-
	Lssa7g03781	422	NCBIfam	glyceraldehyde-3-phosphate dehydrogenase, type I	87	409	IPR006424	GO:0006006(InterPro)\|GO:0016620(InterPro)\|GO:0050661(InterPro)\|GO:0051287(InterPro)
	Lssa7g03781	422	Gene3D	Dihydrodipicolinate Reductase; domain 2	235	401	-	-
	Lssa7g03781	422	FunFam	Glyceraldehyde-3-phosphate dehydrogenase	86	245	-	-
	Lssa7g03781	422	SMART	gp-dh-n-7	86	235	IPR020828	GO:0051287(InterPro)
	Lssa7g03781	422	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain	87	187	IPR020828	GO:0051287(InterPro)
	Lssa7g03781	422	SUPERFAMILY	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	234	397	-	-
	Lssa7g03781	422	FunFam	Glyceraldehyde-3-phosphate dehydrogenase	234	399	-	-
	Lssa7g03781	422	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	229	247	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	256	272	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	313	330	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	353	368	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	PRINTS	Glyceraldehyde-3-phosphate dehydrogenase signature	194	207	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	PANTHER	GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE	81	415	IPR020831	GO:0016620(InterPro)
	Lssa7g03781	422	ProSitePatterns	Glyceraldehyde 3-phosphate dehydrogenase active site.	233	240	IPR020830	GO:0016620(InterPro)
	Lssa7g03781	422	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	85	251	IPR036291	-
	Lssa7g03781	422	Pfam	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain	240	397	IPR020829	GO:0016620(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03781	K00134	glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr4:108040657	Lssa7g03781	Lssa-Chr7:198683908	dispersed
	Lssa	Lssa-Chr7:198683908	Lssa8g05185	Lssa-Chr8:280443442	dispersed
	Lssa	Lssa-Chr7:198670653	Lssa7g03781	Lssa-Chr7:198683908	proximal