Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03818 | ATGAATATGATTCCACCAAATACGAGCATGGACGCTGCAAGGAAACAGTTCTTGAAGGAATTCGGTGAATCTTACGGTTATCCGAATGCTCCCAAGCACATCGATGATCTCCGAGCTACTGAATTTAAAAGACTCGATGGAAATGTCTACTTGGATCACGCTGGTGCAACTTTATATTCTGAATTACAGATGGAGGCAATATTTAGAGATCTTACTACCACTGTATACGGAAATCCTCATACTCAAAGCAGCTCTAGCTTGACCTCATCAGACATTGTAGAAGATGCTCGTCATCAGGTTCTCAAAATCTGTAATGCATCACCAAAAGAGTACAAATGTATTTTCACTTCTGGAGCAACAGCAGCTCTTAAACTTGTTGGTGAGGCTTTTCCTTGGAGCAATGAAAGCACTTTCATGTATACAATTGAGAACCACAACAGTGTCCTTGGGATCAGAGAGTATGCTCTCAATAAAGGAGCTGCAGCATTAGCAATAGACTTTGAGGAAACTGCACAATCTGATACATTTGGAAGCACTAAATCTTCCATCAAAGTCTCACAGTATCCTATACCAAAGAGAAGTGAAGCTAGGGTTTCAAACAAAGATCCTACTGGACATACATACAATTTATTTGCTTTTCCTACAGAGTGTAATTTCTCAGGAGTGAGGTTTAATCTTGATTTGATAGACATGATTAAGGAAGATTCAGAGCGAATATTGGGAGGTTCTCAACATTCCAGGGGATCATGGATGGTTTTACTTGATGCTGCAAAAGGTTGTTCTACAGAACCTCCGGATTTATCAAAGCATAAGGCAGATTTTGTTGTGATCTCATTTTACAAGCTTTTTGGCTATCCAACTGGACTTGGAGCTTTGGTAGTTGGAAATGAAGCTGCAAAATTACTAAAGAAGACCTACTTTAGTGGAGGGACAGTGGCTGCATCGATTGCTGACATTGACTTTGTGAAAAGAAGAGAAGGTATTGAAGAGTCATTTGAAGATGGAACATTATCATTCTTGAATATTGCATCCATTCGCCATGGATTTAATATCCTAAATACTCTCACCACATCAGCCATATCAAGGCATACCTCATCACTTGCAAGATATACAAAAAATATGCTTTTGGCATTAAGGCATGCAAATGGTGTGGAGGTTTGCAAGATATATGGACTTCATTCTCTAAAGGCAGTGTATAGTGGAGTTGGTCCTGTAATTTCTTTTAACTTGAAACGGTCTGATGGTTCTTGGGTTGGCCATCGTGAAGTGGAAAAATTGGCTTTTTTGTCTGGAATTCAACTAAGGACAGGATGCTTTTGTAATCCTGGTGCATGTGCCAAGTATCTTGGTTTATCTCATTCAGATCTGATATCCAACATTGAGGCTGGACATGTATGCTGGGATGATTATGATATATTAAATGGGAAACCAACTGGAGCTGTTAGAGTATCTTTTGGATATATGTCAACTTTTGAAGATGCATGGAAATTCATTGACTTTGTTGTGAGATCTTTTGTATTGTTGCCTACCAATGGTATAAATCTTAATCCATTAAGATCCACAGAAAGTTCACATCATCTTACATCAATTGTGGTGTATCCAATAAAGTCATGCTCAGGGTTCAGAGTGGACACTTGGCCTCTCAGCAGTACTGGATTGTTATATGATCGAGAGTGGCTTCTCAAAAGCATGAATGGTGAAGTTCTTACACAGAAGAAGGTACCTGAAATGTACTATATAAACACAAAGATTGACCTAAAAATGGGAATGCTTCATGTGGAATCTTCTAGATGCAAAGAGAAACTATCTATTGAACTCAAATCTGATACTTTTTCTGTAGTAGAAGAAATTAATATACATGCCCAAAGATATGAAGTTTTGGGATATGATAACAAGATTGACGAATGGTTTAGTAAAGCAGTTGGGCGTCCTTGTTATCTGTTAAGATCAAGTTCTAGACGCTGTAACCACTTTAACAGAAACAAAAACAAAAACATGGGCACATGTAGAGATGTGAATACTAGATTAAACTTCGTGAATGAAGCCCAGATTTTAATGGTATCTGAGGAGAGTGTATCTGACCTCAATTCTAGACTAGATTCTAACAGGTTTGTTGATCCAATGATATTCCGACCTAATCTAGTTATATCTGGTGGTGGGCCCTGTGTTGAAGACACGTGGACTGGTCTCAAGATTGGAAATAATCACTTCATGTCATTGGGTGGGTGTAATCGTTGCCAGATGATTAATTTGAATTATGAAGGTGGTGAGGTAAAGAGATCAAATGAGCCTTTAGCTACTTTAGCATCATACAGGAGAGAAAAGGGGAAAATACTCTTTGGAATTTTACTGAGGTATGAGTGTGACAATGAGGTTGGGGAAGAGATGTCTTCATGGCTTCAAGTGGGACAAGAAGTACACCCCGATACATAA | 2433 | 38.64 | MNMIPPNTSMDAARKQFLKEFGESYGYPNAPKHIDDLRATEFKRLDGNVYLDHAGATLYSELQMEAIFRDLTTTVYGNPHTQSSSSLTSSDIVEDARHQVLKICNASPKEYKCIFTSGATAALKLVGEAFPWSNESTFMYTIENHNSVLGIREYALNKGAAALAIDFEETAQSDTFGSTKSSIKVSQYPIPKRSEARVSNKDPTGHTYNLFAFPTECNFSGVRFNLDLIDMIKEDSERILGGSQHSRGSWMVLLDAAKGCSTEPPDLSKHKADFVVISFYKLFGYPTGLGALVVGNEAAKLLKKTYFSGGTVAASIADIDFVKRREGIEESFEDGTLSFLNIASIRHGFNILNTLTTSAISRHTSSLARYTKNMLLALRHANGVEVCKIYGLHSLKAVYSGVGPVISFNLKRSDGSWVGHREVEKLAFLSGIQLRTGCFCNPGACAKYLGLSHSDLISNIEAGHVCWDDYDILNGKPTGAVRVSFGYMSTFEDAWKFIDFVVRSFVLLPTNGINLNPLRSTESSHHLTSIVVYPIKSCSGFRVDTWPLSSTGLLYDREWLLKSMNGEVLTQKKVPEMYYINTKIDLKMGMLHVESSRCKEKLSIELKSDTFSVVEEINIHAQRYEVLGYDNKIDEWFSKAVGRPCYLLRSSSRRCNHFNRNKNKNMGTCRDVNTRLNFVNEAQILMVSEESVSDLNSRLDSNRFVDPMIFRPNLVISGGGPCVEDTWTGLKIGNNHFMSLGGCNRCQMINLNYEGGEVKRSNEPLATLASYRREKGKILFGILLRYECDNEVGEEMSSWLQVGQEVHPDT | 810 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03818 | 810 | SUPERFAMILY | PLP-dependent transferases | 41 | 502 | IPR015424 | - | |
| Lssa7g03818 | 810 | SUPERFAMILY | MOSC N-terminal domain-like | 527 | 657 | - | - | |
| Lssa7g03818 | 810 | Pfam | MOSC domain | 674 | 806 | IPR005302 | GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro) | |
| Lssa7g03818 | 810 | Pfam | MOSC N-terminal beta barrel domain | 526 | 644 | IPR005303 | - | |
| Lssa7g03818 | 810 | ProSiteProfiles | MOSC domain profile. | 653 | 809 | IPR005302 | GO:0003824(InterPro)|GO:0030151(InterPro)|GO:0030170(InterPro) | |
| Lssa7g03818 | 810 | Pfam | Aminotransferase class-V | 49 | 163 | IPR000192 | - | |
| Lssa7g03818 | 810 | Pfam | Aminotransferase class-V | 249 | 494 | IPR000192 | - | |
| Lssa7g03818 | 810 | Gene3D | - | 64 | 354 | IPR015421 | - | |
| Lssa7g03818 | 810 | PANTHER | MOLYBDOPTERIN COFACTOR SULFURASE MOSC | 12 | 506 | - | - | |
| Lssa7g03818 | 810 | Hamap | Molybdenum cofactor sulfurase [MOCOS]. | 24 | 808 | IPR028886 | GO:0006777(InterPro)|GO:0008265(InterPro) | |
| Lssa7g03818 | 810 | SUPERFAMILY | PK beta-barrel domain-like | 671 | 762 | IPR011037 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03818 | K15631 | molybdenum cofactor sulfurtransferase [EC:2.8.1.9] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:202180220 | Lssa9g01200 | Lssa-Chr9:36884131 | dispersed | |
| Lssa | Lssa-Chr7:202180220 | Lssa2g02743 | Lssa-Chr2:180158667 | transposed |