Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03937 | ATGAAAGATGTTGTTATGAAGAAATACAAGAGAGCAAAAACAAACCTAGAAATGTTGTGTAAGTTTGGAGCTCAAATACTACACGGAGTTGATTCAACCATAATGAAGCTTCACATGGATCTTCGAATGCGGAAGTTTGACCGGATTGTATACAATTTCCCACATGCTGGTTTTTTGGGGAAGGAAAGTGATCACTTGGTCATCATGAAGCATAGAAATTTGGTACGTGGTTTCTTGAGAAACGCAAGTGGCATGTTGCGTCCAAACGGTGAAATTCATGTGACACACAAGGCTGCTCGCCCGTTTGACTCATGGAATATTGAAGAATTGGCAACTCAAAGTGGTTTAACATTGATTGAATGTGTCGAATTCAAGATTGAAGATTATCCCGGTTACAACAACAAAAGAGGAGCTGGTAGGAATCCCGACGGAGCATTTCCTCTAGGGGAATGCAATACTTTTAAATTCATAGTAACTTCAAAACCCTTGAAACTATTGCGTCAAAAACCTCGAGAAATTCCATTACAAAGAGCGAATGAACAGATTGTTATGAATCCTTTGCAAACTGGTGATTGCTTTTGGATTTTCAAGGAGTATTTCAATCATGCACGATACACCTTTGGGGAACCTGATTATTTTCTCCCGTATAATGTTCCGGACATGCTGAGATTAGGGTTTGAAAGATACAATGCAGATGATTGTGGGAAACCCTTGGATGGTTATTTAAATCATTTGGAAGAGCTTTGGAATTTAAGCAGAAGGAGGCTAGTATTCTTGCGAAACAGATTATGGGAAATTGATCATCAGTATTAA | 813 | 38.75 | MKDVVMKKYKRAKTNLEMLCKFGAQILHGVDSTIMKLHMDLRMRKFDRIVYNFPHAGFLGKESDHLVIMKHRNLVRGFLRNASGMLRPNGEIHVTHKAARPFDSWNIEELATQSGLTLIECVEFKIEDYPGYNNKRGAGRNPDGAFPLGECNTFKFIVTSKPLKLLRQKPREIPLQRANEQIVMNPLQTGDCFWIFKEYFNHARYTFGEPDYFLPYNVPDMLRLGFERYNADDCGKPLDGYLNHLEELWNLSRRRLVFLRNRLWEIDHQY | 270 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03937 | 270 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 3 | 136 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) | |
| Lssa7g03937 | 270 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 4 | 137 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Lssa7g03937 | 270 | Gene3D | Vaccinia Virus protein VP39 | 3 | 124 | IPR029063 | - | |
| Lssa7g03937 | 270 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 29 | 125 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03937 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:205507999 | Lssa7g03937 | Lssa-Chr7:205551574 | dispersed | |
| Lssa | Lssa-Chr7:205551574 | Lssa9g03916 | Lssa-Chr9:197804014 | dispersed | |
| Lssa | Lssa-Chr7:205547729 | Lssa7g03937 | Lssa-Chr7:205551574 | tandem |