AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03943 | ATGGGAAAGAGAAAGGAGCGTAGACTGGCGGCGAAGACTGCAGTTAATAGAAGAGTAAAACTCGATCTTATGGCGGAACCCTCTGGAGATTTTGGTGATTCGTCCAACAAAGAAGACGTTGAAGGTGGCGGCAATTCAAAAAATCATGCTGGTTCACCCGATTCACCATCTTCTTCAGGTCAAAAGCCAGAAAATCCTCTTTTGTTGCTTGGACAATATAGCGATGAGGAATTGGAGGAAGAATCTGGTAAAGAAATCAGCCATGATACTAGAGAGAATTCACCAGCCGAGCTTGATGAACAGGTAAAGGCAGAAAGTCATGAGGGTACAGAAGTAGATAAAGATGAAAATATTACTTGTGAAAAACCTGATCAAGAGAACAAAGAGCACTCTTCTTCATTGGATGTGGAAGAAAATGGTGTTGTTGAAGATGATATAGTTTTGCCCTCACACAAAGACATGGATGAAGTGGAGCAGACAACTATGTCATGGACATCCGACACACAAACAGAAAATATGGATTCAGGATGGAAAATGGTGTTGCATGAGGAGAGTAATTCATATTACTACTGGAACATTGCGACTGGTCAAACTTCTTGGGAAGTCCCTGTTGACCTGGTTCAAGGAAATGAACCAGCCTATGATCCTCAATCTGTTACAGAAGTTGAAGAGATGAATGTAACTTCTGATGATACACAACCGAATGATGGGCCCACAAAACCTTTGGTTTTTGAGGCCACTGACAAGGACAGTTGTAGGCCAGAATTACAAGTGCAGACTGAAAACCATACAGATATCATGACCATGTCAAATGATGTGGTCGAGGGTAATTATGTCAATACAATTGATGGTGTGAATAACGGGGAAGCCCACCATACTGATTCTTTACGTCTTTTGCAACTTGGTGAAAGTTTATCGGAGAGATTAAAATCTTTGAAAGGGGAAAACAACGAGATATCAAAGCTGATGATTGAACTTGATGTAAGGCTTGCAGACATTAAGTCATTAGTACCTTACGGATCATCATTGCTTCCTTTTTGGCTTCATTCTGAAAATCATTTGAGAAAACTAGAATCCGCAATCAACAATGAGATTCAAGAACATTCTCAATCACCAAATGAGGCAGAAAAGAAGGTAGAAGAGAACATGAATGAAGCAACTGCAAGTGAAAAAGAAGAAAAGGAAAATGAAAATGCAGTTCCTCAAGCAGATACAGATGACGACATGGATGTTGAAATGGAGGTTGAAGATGAACCAGTTGTCCAAAACAGGCCCCAATCTGAAGAAGAATCTGAGGTTCCACCACCACCGAATGACGAATGGGTCCCGCCTCCACCACCGGACGATGAACCGTTACCTCCACCACCGCCAGATGAACAACCTGAAGCCACATTCCCTCCACCGCAAGCTTACTCATACGGAGGAGAAGGAGAAGAATATGCACATTTTGCATATGGGGGTCCCGCTTTTGAATACTATGGTCAACAAGTTGTTGCAAATCATGATTATTTTGTAGATGCGAATGGAGCACCCCTCACAGCCCTTTATTATGGCACCTCAGTAGTGGGAAACCCCCCATATCCAGGTGGCACTTCAGTAGTGGACCCTGGAGAACATGTGACATATTACACCATACAAGAAGGGTCTGTACCAATTCAGCCAGTGATTGGCAGTGAAAGTGTTGCAGCAACTTGTACTGTATCTGCTCCAACAGAATCATCATCAGTTCCTAAGGTTCAACCTAAAGGCAAGTTTGTGCGAAATAAAAAACGAACGGTTGCTGCAGTCCCTGGTTTAAGATCCAATAAGAAGGTTTCAGGCTTGGTGGATAAGTGGAAAGCTGTTAAAGAGGAATTACATGAAGAAGACGAGGAAGACGAAGAACCTGAAAATGCTTTAGAAGCTTTAGAGAAGAAAAAGCAACGAGAGATTGAGCAATGGCGTGCACAGCAGATTGCAACTGGAGAAGCCAAAGACAATGCTAACTTTCAGCCTCTTGGTGGTGACTGGCGAGAGAGAGTTAGAAGGAAGAGAGCTAAAAAGTCGATGGAAGCTGAAGATAAGGAAGCCAAGGGCACTGTTGATACAACAAACCAAAAACCTGATCTTGTTCAACTTACAAAACAACTTCCATCCCCTTGGCAGGCATATTGGGATGAAGCATCGAAGCAAGTTTATTATGGGAACTCAAAAACATCAGAGACTTCATGGACCAAACCTCAACCCTAA | 2229 | 42.53 | MGKRKERRLAAKTAVNRRVKLDLMAEPSGDFGDSSNKEDVEGGGNSKNHAGSPDSPSSSGQKPENPLLLLGQYSDEELEEESGKEISHDTRENSPAELDEQVKAESHEGTEVDKDENITCEKPDQENKEHSSSLDVEENGVVEDDIVLPSHKDMDEVEQTTMSWTSDTQTENMDSGWKMVLHEESNSYYYWNIATGQTSWEVPVDLVQGNEPAYDPQSVTEVEEMNVTSDDTQPNDGPTKPLVFEATDKDSCRPELQVQTENHTDIMTMSNDVVEGNYVNTIDGVNNGEAHHTDSLRLLQLGESLSERLKSLKGENNEISKLMIELDVRLADIKSLVPYGSSLLPFWLHSENHLRKLESAINNEIQEHSQSPNEAEKKVEENMNEATASEKEEKENENAVPQADTDDDMDVEMEVEDEPVVQNRPQSEEESEVPPPPNDEWVPPPPPDDEPLPPPPPDEQPEATFPPPQAYSYGGEGEEYAHFAYGGPAFEYYGQQVVANHDYFVDANGAPLTALYYGTSVVGNPPYPGGTSVVDPGEHVTYYTIQEGSVPIQPVIGSESVAATCTVSAPTESSSVPKVQPKGKFVRNKKRTVAAVPGLRSNKKVSGLVDKWKAVKEELHEEDEEDEEPENALEALEKKKQREIEQWRAQQIATGEAKDNANFQPLGGDWRERVRRKRAKKSMEAEDKEAKGTVDTTNQKPDLVQLTKQLPSPWQAYWDEASKQVYYGNSKTSETSWTKPQP | 742 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03943 | 742 | ProSiteProfiles | WW-rsp5-WWP domain profile. | 708 | 742 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | CDD | WW | 711 | 742 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | SMART | ww-5 | 172 | 205 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | SMART | ww-5 | 709 | 742 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 1 | 137 | - | - | |
| Lssa7g03943 | 742 | SUPERFAMILY | WW domain | 164 | 204 | IPR036020 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | Gene3D | - | 165 | 216 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 365 | 472 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 654 | 706 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 402 | 416 | - | - | |
| Lssa7g03943 | 742 | CDD | WW | 175 | 205 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | ProSitePatterns | WW-rsp5-WWP domain signature. | 714 | 740 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | SUPERFAMILY | WW domain | 705 | 740 | IPR036020 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 430 | 464 | - | - | |
| Lssa7g03943 | 742 | Gene3D | - | 705 | 742 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 48 | 65 | - | - | |
| Lssa7g03943 | 742 | Pfam | WW domain | 175 | 203 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | Pfam | WW domain | 710 | 740 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | Coils | Coil | 671 | 691 | - | - | |
| Lssa7g03943 | 742 | PANTHER | OS06G0298400 PROTEIN | 267 | 399 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 669 | 695 | - | - | |
| Lssa7g03943 | 742 | Coils | Coil | 630 | 650 | - | - | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 81 | 137 | - | - | |
| Lssa7g03943 | 742 | Coils | Coil | 376 | 397 | - | - | |
| Lssa7g03943 | 742 | ProSiteProfiles | WW-rsp5-WWP domain profile. | 171 | 205 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | ProSitePatterns | WW-rsp5-WWP domain signature. | 177 | 203 | IPR001202 | GO:0005515(InterPro) | |
| Lssa7g03943 | 742 | MobiDBLite | consensus disorder prediction | 370 | 401 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03943 | K24774 | formin-binding protein 4 |