AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03962 ATGTTGAGGATTAAGAGGGTTCCTACTATTCTTTCCAACTACCAGAAGGAGGGGGTCGAGGAAGGTGGCGCAGCCCGTGGTTGCGGCCGTAATTGCCTCAGAAACTGTTGCCTAACAGGGGCTAAGCTACCTTTGTATGCTTTTCCAAAATCCAACAAGGTTGATTTATGCCACAATAATGAGGCCCCTTTTGCCTTCTTGGACTCCCTTCTTCTAGGAGAGTGGGAGGAACGAATGGAGAGGGGTCTTTTTCGCTATGATGTTACTGCTTGCGCCACTAAGGTGATTCCAGGTGAACTCGGTTTTGTGGCTCAGCTGAATGAAGGTCGCCACCTTAAGAAACGGCCCACTGAGTTCCGAGTTGACAAGGTGCTACAGCCTTTTGATGAGAACAAGTTCAACTTTACCAAAGTTGGACAAGAGGAAGTGCTATTTCAGTTTGAAGCAAGCGAAGATGGTGAAGTCCAGTTCCATCCAAATGCTCCAATTAATGTGGACGGTTCACCAAGTGTAGTTGCCATTAATGTATGTGATGAATGCTTTTTTTTTCATCTTCTATGTTATAGTATGATCTTCATACAAACAATCTAA 591 44.84 MLRIKRVPTILSNYQKEGVEEGGAARGCGRNCLRNCCLTGAKLPLYAFPKSNKVDLCHNNEAPFAFLDSLLLGEWEERMERGLFRYDVTACATKVIPGELGFVAQLNEGRHLKKRPTEFRVDKVLQPFDENKFNFTKVGQEEVLFQFEASEDGEVQFHPNAPINVDGSPSVVAINVCDECFFFHLLCYSMIFIQTI 196
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03962 196 PANTHER GDP-D-GLUCOSE PHOSPHORYLASE 1 3 177 IPR026506 GO:0005737(PANTHER)|GO:0006006(PANTHER)|GO:0080048(InterPro)|GO:0080048(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03962 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
127160 Lssa5g00118 Lssa7g03962
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr5:6623487 Lssa7g03962 Lssa-Chr7:206974202 wgd