AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03986 ATGAAGATGAACACCAAATCCCTAAAACTCATCATCTTTCTCTTCATCCTCAATTCCATCACCCTTTACCTCTACTTCTCTTCTCACCCCGATTACTTCCGCCGCCGCCGTACAACCCAAAACATTCCTAATTCCATACCACAATTCCACTCACCCTTTCCCGATCGCACCCATCTTGTTTCTTTGTCAAATTCCAATAAACCCTGGCCCATCTTGCCTTCTTACCTCCCTTGGTCTTTAACCCCTAACATCTCTTTTAGATCCTGTGAAGCCTATTTTGGTAATGGATTCACTCATCGTGTCGATCTGCTCAAGCCCTCGCCTGAAAGTAACCGTAAAGTGGGTAAAGATGGAAGAGGATGGTTCCGGTGCTTTTATAGTCAGACTTTGCGGAGTTCCATATGCGAGGGCGGAACGATGCGGATGCATCCAGACAAAATTAAGATGTCCGCTGGTGGGGAGGTATTGGAGAGTGTGATTGGCAGGGGGGAGGAGGAAGAGTTGCCGGAGTTTGAATTCGGAGCCTTTGATCTGGAGGTTACTGGGAATTCCAAGAATCATGGTAAGAAGCTTGCTACTGAGGGTTTTTTGAACGAATATTTGCAGAAAGGAGAGATCTCAAGACATACTATGCGCGACTTGATCGATTCAATTCAGTTAGTTGGCGCCAATGAATTTGAGTGCTCTGAGTGGGTTGAGGAGCCAACACTGCTGATCACTCGGTTTGAGTATGCAAACATGTTTCACACAGTCACAGACTGGTACAGTGCGTACGTGTCTTCCAGAGTTACAGGCTTGCCAAACCGACCTCAATTGGTGTTCGTAGATGGTCACTGCATGACGCAATTGGAAGAAACATGGAAAGCCGTGTTCTCAGGTGTAAGATATGCTAAAAACTTCAGTGGTCCGGTTTGCTTTCGTCATGCTATCCTGTCGCCTTTAGGTTATGAAACGGCCATGTTCAGGGGTCTGTCTGAAAATATCGATTGTTATGGGGCTGCTTCTGCCCATGATCTTTGGCATAACCCAGATGATAAGAAAACAGCCAGAATCACAGAATTTGGGGAGATGATAAGAGCTGCTTTTGCACTTCCTTTACACACTGCTCATAAACACAGCTCACGCATCCACAATGTTCTTTTTGTGAGGCGTGAGGATTATTTGGCTCATCCTCGCCATGCTGGCAAGGTTCAGTCTAGACTTAGTAACGAACAACAAGTGTTTGATGCCATAAAGAGTTGGTCCCTGCTGCTGAGTCATACAGAATGTAAAGTGAATGTTGTTAATGGGTTGTTTGGACATATGTCTATGAAAGAGCAAGTCAGGGCCATTCAAGATGCTTCTGTTATTGTGGGTGCTCATGGGGCTGGATTGACTCACATAGTCTCAGCAGCACCAGAAGCAGAAATACTGGAGTTGATTGCTACTGAGTTTAGGAGGCCTCATTTTGCACTCATTTCTCAATGGAGGGGCCTCAATTATCACCCTATTTTTCTCACCGGATCTCATGCTAACCCAACACTTGTTATTGACAAGCTCCGTGACATTTTCAAGACCTTAGGATGCTAA 1569 45.44 MKMNTKSLKLIIFLFILNSITLYLYFSSHPDYFRRRRTTQNIPNSIPQFHSPFPDRTHLVSLSNSNKPWPILPSYLPWSLTPNISFRSCEAYFGNGFTHRVDLLKPSPESNRKVGKDGRGWFRCFYSQTLRSSICEGGTMRMHPDKIKMSAGGEVLESVIGRGEEEELPEFEFGAFDLEVTGNSKNHGKKLATEGFLNEYLQKGEISRHTMRDLIDSIQLVGANEFECSEWVEEPTLLITRFEYANMFHTVTDWYSAYVSSRVTGLPNRPQLVFVDGHCMTQLEETWKAVFSGVRYAKNFSGPVCFRHAILSPLGYETAMFRGLSENIDCYGAASAHDLWHNPDDKKTARITEFGEMIRAAFALPLHTAHKHSSRIHNVLFVRREDYLAHPRHAGKVQSRLSNEQQVFDAIKSWSLLLSHTECKVNVVNGLFGHMSMKEQVRAIQDASVIVGAHGAGLTHIVSAAPEAEILELIATEFRRPHFALISQWRGLNYHPIFLTGSHANPTLVIDKLRDIFKTLGC 522
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03986 522 PANTHER PUTATIVE-RELATED 13 522 IPR007657 GO:0016757(InterPro)
Lssa7g03986 522 Pfam Glycosyltransferase 61 369 470 IPR049625 GO:0016757(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03986 K03714 glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]