Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03989 | ATGGGATTTTCATCTGCTGCTGCTTGTGTAGGTCTTCATAATTTGCCATGGAACTTCCACTCCCATCGTCAAAGGGTTTTCAAGATTCTTTGTTCGAGTGCTAAAGACACACATCAGAGTCCGATTACACTTGAGCTTTCAAACCCCAATAAAGCACTCAGGGCTTCGTCTTCCCAGATCGAAGCAGTTCAATTTGATGAAAGAAGTAGCCCCTTTGAGGTTGCAAAGCTGTTGGGATGTACTTCATGGTCAGGGGCTGGACCAGGCCTGATGGATGCTGCAACTCGGGGTGCTCTTGAAGCAGGAAAGCCGGTTGGTGGATTCAAGATTGCTAAAGAAGCAGGGGAATGGACAGCAACCAATTTTCATCCGTATCTTCCTTCTCATGCTTACCTTACATGCAGGTTTTTTTCTGCAAGAAAGCATGGGTTGGTGGATGCAGCGGTTAGAAGTAGTAAAGGGGAGAAGACGGGTGTGATTGTACTACCAGGAGGGATTGGCACTCTGGATGAGGCTTTTGAGATTCTTGCACTCATCCAGTTAGAGAGGATAGGTTCAGCACTTCCTGTTCCTTTTGTTTTGATGAATTATGACTCCTTTTATTCCAAGCTTTTACAGTTTCTGGAGGTATGTCAAGATTGGGGGACTGTTTCCAAAGGAGAGGTTTCCTCCCTTTTCAAAGTATGTAATAATAACTCTGAAGCACTCGCATATCTTGCACAATTTTATAATCAATGCTAA | 741 | 44.26 | MGFSSAAACVGLHNLPWNFHSHRQRVFKILCSSAKDTHQSPITLELSNPNKALRASSSQIEAVQFDERSSPFEVAKLLGCTSWSGAGPGLMDAATRGALEAGKPVGGFKIAKEAGEWTATNFHPYLPSHAYLTCRFFSARKHGLVDAAVRSSKGEKTGVIVLPGGIGTLDEAFEILALIQLERIGSALPVPFVLMNYDSFYSKLLQFLEVCQDWGTVSKGEVSSLFKVCNNNSEALAYLAQFYNQC | 246 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03989 | 246 | SUPERFAMILY | MCP-YpsA-like | 79 | 239 | - | - | |
| Lssa7g03989 | 246 | Gene3D | - | 20 | 243 | - | - | |
| Lssa7g03989 | 246 | PANTHER | EXPRESSED PROTEIN | 72 | 240 | - | - | |
| Lssa7g03989 | 246 | Pfam | Possible lysine decarboxylase | 91 | 238 | IPR031100 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03989 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr3:199178131 | Lssa7g03989 | Lssa-Chr7:208723258 | dispersed | |
| Lssa | Lssa-Chr7:208723258 | Lssa8g01447 | Lssa-Chr8:55567818 | dispersed | |
| Lssa | Lssa-Chr7:208723258 | Lssa9g04472 | Lssa-Chr9:225248444 | transposed |