AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa8g01693 ATGGAGTTCTGGGTGGTTGCAGCAGCTACTGGTGCAGGTTACGTGGCCAAGCATTGGCAGAACTTATCAGGGGAGAAAGATGGCTCATCAAAGCAGTCACAACCTCTGCCATCGCCACGCCTGCAACAAGACGCACGCCAAGTGTTCGACAAAATACCTGACCCAGTTTTCCCATTGCCAAAGTTAGCAAAAAGATGCTTGTTAGACAGAGATGTTGATCAGGTTTCAGGTTCAACTTCAACCTTTATCGAGAAACGAGTAGATCAAGATCACACAAATGAAATCAACGGAAAACAAGAGTACTTAGACACATCTTCTGACAATCGTTTACACAAATTCAAAACCAAGAACATGAACAGAAAACCATTCACGAGTCTACGGCCCTTAGTGGTAACTGGTAACAACAAAGACTCAAAAGATCATAAGGTCGTGTTGATGGAAGAAAAAGAAAATGGCAATGGTGCATGTATAGACGACTCACCATTCTTGGAACAACCAATTGGATCAATGAAGCTTCCAAAAAGACAAAACGAAAATTTTGACATGGTGTTGTTATTTGTTGGTATTACAATGGGGATACTATCGGGTACTTTTACTAATCAAAAAGAAATCGAGCATCTAAATGATTTGCTAGAACAAGCTGAGAATATGGTTAAAGATTTACACTCTAAACTTGAAATAAAAGATGGATTTACCACAAAGAAGCTTGAAATCGAGCCAGATGTAACTGCAATTAATAGTCCAAAAGGGGAAAAGTTTGAAAAGTTTGAGTTAACAAGTGACATTGAGGCAGAACTTGAGGCTGAGCTTGAGAGGTTGGAAGAAAATATGAAGAGTTGCACAACGCAAAGATTGTCTAATGTTGTTGAGATTGATTCAGACTTTGAAGCAGACATGGCTAGAGGAGATCTGAACCTAGATACAGTCACTTGGCAACTCGATAGCCAATCATCCGAATCAGATCCCAGGGGCAAAACTGGAAAAAGTAGCAAAAGTGAAAACACCAACCGCGTTTTCACTCCAAACTACGCAGTTTCATCAATAGACTTACAATTACGCCTTCATGAAGTAATCGAATCCAACCTCGAAGCACGTATCAAGGAACTCGAGTCACTTCTCAAAAATCAAAATACCCAAAATACCCCTCGTTCACATTCACCATGCCCACAAGAAGAAAACTCTTTCTGGGACTTTGACCACACCAGAATCGAATCTTTTTCATCAACCCCTTAA 1233 40.39 MEFWVVAAATGAGYVAKHWQNLSGEKDGSSKQSQPLPSPRLQQDARQVFDKIPDPVFPLPKLAKRCLLDRDVDQVSGSTSTFIEKRVDQDHTNEINGKQEYLDTSSDNRLHKFKTKNMNRKPFTSLRPLVVTGNNKDSKDHKVVLMEEKENGNGACIDDSPFLEQPIGSMKLPKRQNENFDMVLLFVGITMGILSGTFTNQKEIEHLNDLLEQAENMVKDLHSKLEIKDGFTTKKLEIEPDVTAINSPKGEKFEKFELTSDIEAELEAELERLEENMKSCTTQRLSNVVEIDSDFEADMARGDLNLDTVTWQLDSQSSESDPRGKTGKSSKSENTNRVFTPNYAVSSIDLQLRLHEVIESNLEARIKELESLLKNQNTQNTPRSHSPCPQEENSFWDFDHTRIESFSSTP 410
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa8g01693 410 PANTHER EMB|CAB62613.1 1 377 IPR040348 GO:0008356(InterPro)
Lssa8g01693 410 MobiDBLite consensus disorder prediction 313 338 - -
Lssa8g01693 410 MobiDBLite consensus disorder prediction 375 394 - -
Lssa8g01693 410 MobiDBLite consensus disorder prediction 375 391 - -
Lssa8g01693 410 Coils Coil 256 283 - -
Lssa8g01693 410 Coils Coil 204 224 - -
Lssa8g01693 410 Coils Coil 359 379 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa8g01693 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3920420 Lssa Lssa4g03859 Lssa-Chr4:205697174 Lssa8g01693 Lssa-Chr8:69859417