Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa8g01753	ATGTACCGGCATATGGCGGCAGATCAGACTCATGGTGGACAACCTACTGATAGCGGAGATGTGGTGGTGACTCTTGATCAAATTCCTAGATGGAGTGATGGGGATTTTAGATATTCTTATGAAATTGAAGATCCCAATTTTCCAAATTCAAACTTCCCTGATCCCTTGGCTTCTTCTTCTGGAGCTGAAAGTAGTGGAAAGGTCTCAAGGTTTCCTGTTGACCATGAAGTTAACTCAAAAATCTATCTTTGGAGAGGAAACCCATGGAATCTTGAAGTAGATGCTGTTGTCAATTCCACAAATGAGAATTTGGATGAAGCACAATGCAGCCCTGGTTTGCATGCTGCAGCTGGGCCTGGTCTAGCTGAAGAATGTGCAACATTGGGTGGCTGTAGAACAGGGATGGCAAAAGTTACTAATGCATATGATCTTCCTGCAAGGAGGGTTATACATACAGTTGGGCCTAAGTATGCTGTAAAATATCATACTGCAGCAGAAAATGCTTTGAGTCACTGCTATCGTGCTTGTTTAGAACTCCTCATTGAAAATGGACTCCAAAGGTTGTTTCAAATCCATAGGCTAAATTTTACAATCATTTATTATATTTATTTTTATGTAATATACTTGAGCTTATTATCCCTTGGAATCTTTAAATGTAGCATTGCTATGGGGTGTATATACACAGAAGCCAAAAATTATCCACGAGAACCAGCAGCCCATGTGGCAATAAGAACTGTTCGCCGATTACTTGAGAAACAAAAGGATAAAATTACAGGTGTTGTCTTTTGTTTAACAACAACAAATGATACTGAAATATATAAAAGACTACTTCCACTCTACTTTCCTCGTGACAAAAAGGAAGAAGAGATTGCAATTTCAAAGCTTCCTGCTGATGTTGGAGATGAAAATGGTGAAACAGTAATAGATGAAAGAAAAATCAGAATAAAACCATTACCAAATCTCAAGAAAAGTAGTAGCCCTAAACCTCAACGAGCCTCACTAGATGTTCCTGTTAGTGATCTTGTAATGGCTAGAAGGAACTCTTCGCATTTGGAAGCATATTTAGATCCTGCTTTTATGTCTATAATTAAAGATCCTGATCAAAGGCGTAAGGAACAATGGGAAAGAACTGCTCGAGCACAAAATGGATTTAATTTTGCGAAAATGTTAGGGTTTGGTGATCTTGGAGGCCCAAAACTTTCTGCTGCTGAAGAATATTCGTTACATTCTAGATATCTTGCTAAAGCCAATTCTCTTAATCTTTCTGAAATAGCAGAAATGAAGATTCTATACAGGGGAGGGGTAGATAGTGAAGGCAGACCAGTAATGGTTGTAGTTGGAGCACATTTTCTCCTTCGTTGTCTTGATCTTGAAAGATTTGTTCTTTATGTAGTAAAGGAGTTTGAACCCTTGATACAAAAACCTTATAGCATTGTTTACTTCCACTCTGCTGCATCTCTACAAGTGCAGCCAGATTTGGGATTTATGAGGAAATTGCAGCAAATACTTGGTAGGAAAAGCCAGCGCAATCTTCATGCAATATACATCCTCCACCCGACCTTTGGACTCAAGGCTGCCATACTTGCATTGCAACTATTAGTCGATGGCATGGTGTGGAAAAAGGCTGTATATGTTGATCGACTTCTTCAGCTTTTCAGATATGTTCCTCGTGAACAGCTAACAATTCCTGACTTTGTCTTCCAGCATGATTTGGAAGTGAATGGAGGAAAAGGGCTTATTGTGGATCCAAGAACAAAATATGTATACCAACGACCTTAG	1779	39.12	MYRHMAADQTHGGQPTDSGDVVVTLDQIPRWSDGDFRYSYEIEDPNFPNSNFPDPLASSSGAESSGKVSRFPVDHEVNSKIYLWRGNPWNLEVDAVVNSTNENLDEAQCSPGLHAAAGPGLAEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRACLELLIENGLQRLFQIHRLNFTIIYYIYFYVIYLSLLSLGIFKCSIAMGCIYTEAKNYPREPAAHVAIRTVRRLLEKQKDKITGVVFCLTTTNDTEIYKRLLPLYFPRDKKEEEIAISKLPADVGDENGETVIDERKIRIKPLPNLKKSSSPKPQRASLDVPVSDLVMARRNSSHLEAYLDPAFMSIIKDPDQRRKEQWERTARAQNGFNFAKMLGFGDLGGPKLSAAEEYSLHSRYLAKANSLNLSEIAEMKILYRGGVDSEGRPVMVVVGAHFLLRCLDLERFVLYVVKEFEPLIQKPYSIVYFHSAASLQVQPDLGFMRKLQQILGRKSQRNLHAIYILHPTFGLKAAILALQLLVDGMVWKKAVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGGKGLIVDPRTKYVYQRP	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa8g01753	592	Pfam	Macro domain	97	242	IPR002589	-
	Lssa8g01753	592	Gene3D	-	422	573	IPR036865	-
	Lssa8g01753	592	ProSiteProfiles	Macro domain profile.	68	281	IPR002589	-
	Lssa8g01753	592	MobiDBLite	consensus disorder prediction	51	66	-	-
	Lssa8g01753	592	SMART	sec14-4	423	569	IPR001251	-
	Lssa8g01753	592	MobiDBLite	consensus disorder prediction	49	70	-	-
	Lssa8g01753	592	MobiDBLite	consensus disorder prediction	1	20	-	-
	Lssa8g01753	592	SUPERFAMILY	Macro domain-like	69	281	IPR043472	-
	Lssa8g01753	592	CDD	SEC14	427	563	IPR001251	-
	Lssa8g01753	592	PANTHER	GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED	19	315	-	-
	Lssa8g01753	592	CDD	Macro-GDAP2-like	79	280	IPR035793	-
	Lssa8g01753	592	Gene3D	Leucine Aminopeptidase, subunit E, domain 1	14	286	IPR043472	-
	Lssa8g01753	592	SUPERFAMILY	CRAL-TRIO domain	421	560	IPR036865	-
	Lssa8g01753	592	SMART	YBR022w-8	80	226	IPR002589	-
	Lssa8g01753	592	Pfam	Divergent CRAL-TRIO domain	439	570	IPR001251	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa8g01753	K24997	ganglioside-induced differentiation-associated protein 2

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr3:73810678	Lssa8g01753	Lssa-Chr8:71828109	dispersed