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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g01733 ATGGCCACCAATTCCCTCCAATCACTGAACTACCGCCACCGCACACCGCCACTTGGCCGGCGGCAATCACTCGACTCACCGCCGGCGACGCTAGCCATCAATCCAAAGTCACCAAACTACAACCAGACGATAATCTCCATCTCCACCGCCGTAAAAGCATTGTCTACCTCCTCCACCGCCTCCGCCCAATCGACGTCGTTCGACCACCTCAGCCGCCTCCTCTCCGCCAACGACTTCCGTGAAGCCGACAACGAAACCCGCCGCCTCCTGATCGCACTCGCCGGCGAAGCCGCACAGAAGCGCGGGTACGTCTTCTTCTCCGAAGTCCAGTTCATATCCGAATCGGATCTCAAATACATAGACCAGCTATGGATGAATCACAGCAACAACAGATTCGGTTACAGCGTGCAGAAACGAATTTGGGAGAAATCAGAGAAGGATTTCACTCGATTCTTCATCAAAGTTGGGTGGATGAAGAAATTGGACACTGAAATCTTACAATACAATTACCGAGCTTTTCCCGATGAATTCATGTGGGAATTGAACGAAGAAACGCCTGAAGGTCATCTGCCATTGACGAATGCGTTGAGAGGAACACAATTGCTCAATTGCATTTTGACACATCCTGCATTTGCAGATGAACAGGAAACCGCCATTGATGAAGAAGAAGATGAACAAGAACAAAAGCAAAAACAGGAAGAAACCAAAAGCAAGCTGCCGTTTGGGTTCAAAACGAACTACAGTTTTTGA 750 49.47 MATNSLQSLNYRHRTPPLGRRQSLDSPPATLAINPKSPNYNQTIISISTAVKALSTSSTASAQSTSFDHLSRLLSANDFREADNETRRLLIALAGEAAQKRGYVFFSEVQFISESDLKYIDQLWMNHSNNRFGYSVQKRIWEKSEKDFTRFFIKVGWMKKLDTEILQYNYRAFPDEFMWELNEETPEGHLPLTNALRGTQLLNCILTHPAFADEQETAIDEEEDEQEQKQKQEETKSKLPFGFKTNYSF 249
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g01733 249 MobiDBLite consensus disorder prediction 215 249 - -
Mimi16g01733 249 Coils Coil 212 235 - -
Mimi16g01733 249 Gene3D - 6 128 - -
Mimi16g01733 249 FunFam Tetrapyrrole-binding protein, chloroplastic 129 216 - -
Mimi16g01733 249 MobiDBLite consensus disorder prediction 1 27 - -
Mimi16g01733 249 Gene3D - 129 216 - -
Mimi16g01733 249 PANTHER TETRAPYRROLE-BINDING PROTEIN, CHLOROPLASTIC 1 249 IPR008629 GO:0009507(PANTHER)|GO:0010019(PANTHER)|GO:0046906(PANTHER)
Mimi16g01733 249 Pfam GUN4-like 61 209 IPR008629 -
Mimi16g01733 249 CDD GUN4 69 202 IPR008629 -
Mimi16g01733 249 SUPERFAMILY GUN4-like 61 211 IPR037215 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g01733 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
421411 Mimi16g01733 Mimi16g01803
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:76555340 Mimi16g01803 Mimi-Chr16:77692900 wgd