Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g01739 | ATGGCATCCATCAACACCACCCACGGGAAATCGTCGAGGTTGACCACGTTGGCCCAGCAGCTCCGACTTTACAAGCCTGATGAAGAAACGGATTGTGCAACCACGACTCCTGTTGGTTCCGAAAGATTTACACCTAAAAAAGCCGCTGTTCTGATCTGCCTTTTTGAACAAAGCGACGGTGGCCTCCGTGTGATTCTTACTAAACGATCTTCTCGCCTCTCTACACATTCAGGTGAAGTTTCATTGCCCGGAGGGAAAGCTGAGGAAGATGATGTAGATGACGCTGACACAGCGACAAGGGAAGCTAAGGAAGAGATTGGTCTTGATCCTTCACTTGTAGATGTTGTGGCCTATCTTGAGCCTTTTTTGTCTAAGCATCTTCTGCGAGTAATCCCTGTAATTGGCATACTTTCTGATGCAAATGCATTCACTCCAACTCCTAATGTTGCTGAAGTAGATGACGTCTTTGATGCTCCCTTAGAAATGTTTCTAAAGGATGAAAACCGAAGATGCGAACAAAGAGAATGGATGGGAGAGAAGTATCTGGTTCATTATTTTGACTACGAAACAGGTGGTAAGAAATATCTAATCTGGGGTTTAACTGCTGGGATTTTGATTCGCGCTGCATCGATTGTGTACCAGAGACAACCTGATTTTGTGGAACAAAACCCCAAATTCAAGGTTCCTGGTGATTTAAACAAGGACACCATAATGCCATAA | 720 | 44.44 | MASINTTHGKSSRLTTLAQQLRLYKPDEETDCATTTPVGSERFTPKKAAVLICLFEQSDGGLRVILTKRSSRLSTHSGEVSLPGGKAEEDDVDDADTATREAKEEIGLDPSLVDVVAYLEPFLSKHLLRVIPVIGILSDANAFTPTPNVAEVDDVFDAPLEMFLKDENRRCEQREWMGEKYLVHYFDYETGGKKYLIWGLTAGILIRAASIVYQRQPDFVEQNPKFKVPGDLNKDTIMP | 239 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g01739 | 239 | Gene3D | Nucleoside Triphosphate Pyrophosphohydrolase | 24 | 210 | - | - | |
| Mimi16g01739 | 239 | FunFam | Nudix hydrolase 11 | 28 | 210 | - | - | |
| Mimi16g01739 | 239 | PANTHER | NUDIX HYDROLASE | 10 | 228 | IPR045121 | GO:0010945(InterPro)|GO:0015938(PANTHER) | |
| Mimi16g01739 | 239 | Pfam | NUDIX domain | 47 | 155 | IPR000086 | - | |
| Mimi16g01739 | 239 | CDD | CoAse | 46 | 206 | IPR045121 | GO:0010945(InterPro) | |
| Mimi16g01739 | 239 | ProSiteProfiles | Nudix hydrolase domain profile. | 45 | 201 | IPR000086 | - | |
| Mimi16g01739 | 239 | SUPERFAMILY | Nudix | 42 | 205 | IPR015797 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g01739 | K17879 | peroxisomal coenzyme A diphosphatase NUDT7 [EC:3.6.1.77] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 421412 | Mimi16g01739 | Mimi16g01796 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:42826321 | Mimi16g01739 | Mimi-Chr16:76656876 | dispersed | |
| Mimi | Mimi-Chr16:76656876 | Mimi2g00687 | Mimi-Chr2:57513239 | dispersed | |
| Mimi | Mimi-Chr16:76656876 | Mimi16g01796 | Mimi-Chr16:77577832 | wgd |