Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g01816 | ATGAGCAGCACGCAGTCGTTACACTCGCTAGCCTTCAGGGTGATGCGGCTATGCCGGCCGACGTTCCATGCCGAAACCCCGCTCCGATTCGACCTTTCCGATCTCATCGTCGGCGAGGATCTATTCGACGATCCGTCCGCCGGACCTCAGCTCCGGCGTCTCATCCAATCTCAAACTGATTCCTCCACCGATCTCACCTACACTGATCGATTTCTTCTCCGTCATGATCCATCCGATGCCATGGGACTTCCCGGTATGCTCGTCCTCCCTCAGTCATTCGGTGCCATATATCTTGGAGAAACATTCTGCAGTTATATAAGCATTAACAACAGCTCCAGTTTTGAAGTGAGGGACATTATAATCAAGGCAGAAATACAAACAGAAAGGCAGAGAATACTGCTTTTAGACACAACTAAAACACCAGTTGAAACAATAAGAGCAGGAGGACGCTATGATTTCATTGTTGAACATGATGTTAAGGAGCTTGGCGCACACACTCTGGTCTGCACCGCGCAATACAGTGATGGTGATGCTGAGCGCAAGTATCTCCCACAGTATTTCAAATTTATGGTTTCAAATCCTCTTTCTGTCAGGACAAAGGTAACAGAAATGACATACTTGGAGGCTTGTTTAGAAAATAATACAAAATCAAATCTGTACATGGACCAAGTGGATTTTGAGCCTACCTCAAACTGGAGTGCAATATTACTAAGAGCTGATAGTCACCATTCTGAAAAGAGTGTTACGACAAGAGAGATATTCAAGCCACCCATTCTGATTAAATCTGGAGGTGGAATTCACAACTATCTCTACCAGCTAAAATCATTACTGGATGGATCTGCACCAATGAAATTTGAAGGGAGTAATGTTCTTGGAAAACTTCAGATAACATGGCGAACAAATTTGGGTGAACCTGGACGCTTGCAAACACAACAGATTGTTGGTAACCTCTTTACACAAAGGGAGATTGAACTGAAAGCAGCAAAGGTGCCATCTGTCATCATCTTAGAAAAACCCTTTACAGTATACTTGAGTCTTACAAACCTAACTGAGAACAAGCTTGGCCCATTTGAAGTTTTTATTTCTCGGAGTGACAGCCAAGAGGAAAAAAGTCTTCTTGGTACGGGGCTTAAAAAGATCGCTTTACCTCAGGTGGAGGCATTCAGATCTCTGGATTTTCAAATGAACCTAATTCCTTTGGAAGCTGGAATGCAGAAAATTAGTGGCATTACAGTGTTTAATACGACAGAGAAGAAAAGTTATGATCCAGTGCCCGACATCGAGTCCCTCATTACCGTGATAGTTATGTCTTCAAGAAAAAGGAAAAGTGAAAGGATTGCAATCAAATCTTTAAGTAAGTTTACAAACACAGAAGAAGATCCCATCGACTTAGACACCACTGATCAAAGTAAACAAGGTAGGAAGAAGAACATGAAGCAAAAAGATCCCGGAAGTGATTCTGACTTAGAAGAGGAGAAAATTCGTGTCAAAATGAGGAAAAAAGGGATCGCGCTAACAAAGGATGTTAGGTTGTCTTTTACAACGTTGTGGTTACATTGCTTTGCTAATGGTGGTGTTTTTAGAGATGTCGCATATTATGACTCTGATGAATTTGTTGGAAAAGACGTAGATAACGAAGACCGTGGAAGAAAAAGAGGTAAGTTAGGACTGTCGGACACTGAAAGTGATGAAGATGAAATCCTCATTAATTTGAAAAGAAAGGTTCAGAGACAAGGAAAAAAAGATGATGTTCCGGGCAAGAAAAGGGGACATGGAAGTAAAGGAACGGAAGGTAAAGAAATTTGGAAGTGTGAAATGAAGAAGAAAAATGGTAAAAAGAAAATGTATGCTAGTGACAGTGAAGATGCTAAAAGCCAAAAAGGTAAAGAAAAAATGTATGCTAGTGACAGTGAAGATGTTAAAGGCCAAAAAGGAAAAAAGGTCATGAGGCAAACAAGCAAAAAGGTTGATGCTACAGATGGTAGTGGGACAAAGAGGTGGATGATTCTGAACACAAGGTCTTCACCAGCTCAGTTGTTTCGATGTGTGAAACTGTTGAGGGATAACCAAAAAAGGGGAGTTATGGAAATGGGCTTTGGAAATTTGTTGAAATTTAACATGGATGGTATCCCCTCAAAGATGGCACATTTTGTGGTAGATAGGTTGAAATGCAAGAGGATGGAGATTATTTGCAGAGGAGGATGTTTGAAAATTACCCCACAATTGATTCATAAACAAATTGTGGAGAAAATAGAAAGCTCTGAGGATGAAAACACATTTGACTTTAAGATGGATTTCATAGTGTTGTTCATGGCTGTTCTTGTGGAGTGTCATAAAAATGGAAGGGTTAAAGAAGGTATTCTTAGGTATATCACATCACAGACAGATTTTTCAGAAATAGATTGGTGTGATTACATATTTGAATGCCTAAGAAGTTGCAAGATAGGGTGGGCAAGGGATGACAATAGTTCCCCCTTCAATGGTCCACTGACAATACTGACGTTAATCTATGTTGAAGGGTTTGAATGTAAGGGCATCTCTGTTGACAAAAGAATCCACCCAATTGAATTTTGGAACAAAAACCGACTAAAAATAAGGGAGGACTGGGAGATGAAACATGGAGGGTTTGGGAGAGGAAAACTAAACCAAAATTTCGTAGATGAAGGTTCGTCAGGTGAGAGGGAGGAGCCATACGAGAAAACAGAGTTGTTGGCGGGTGTGAAAAAATGTTTAGATGATTGGGGAAATTTGAAAAGCGTGCTAGAAAAAGATTTAACATATTTGATAGCAAGAGATAAGAACAACGAGGACATACAAACAGTTAGGGCTTGCTATGAGAGCCTATTGGAGAAAAAACCTAAATGGGTTAGGCAATTAGATGACGGTGAAAATGATGAAGATGGGGCTGAAAAAATAGAGCTGATTAATGCGTTTGACAGAGACACAGTGGTTGACCTAAATATAACACATCCAGATGTTGGCATTGAAGATAATCAATTTGATGGAGCAAGTTGGAGACTGGGTGTCTCGGACCTGACAGGGGCTTCTACGGGGAAAAACGCTAAAGCAGATTACACTGGTGCTGTTAGCCATTTAGATAATCCTGTGTTTCTGAGTGAAAGTGATAATGAAATCATAAAAAACGGTGGTCCGGTTGATCCTACAAAAACGTCAACCCACCTTGATAGTTCCATGGAAACAGAACAAAGTGTGAATCAGTTCTGCCTTTCGCTGTTGAATGAAGCACCGTTGCAGGACGTGCCTGGGAAAAGTAATATTAAAGAAACAAACGATCATGTCACACGAAATGAAGAAAATCGAGATGGCGAGCTGCAGGGGACGCTACACATGAAACTAACTGAGCAAATACATGGAGGGTTTCAAAATCAAGCTGCACCAGATTTGACGGAGCAGACTGTAAACCAATTTTGCCTGTCGTTGATGAATGACCCTCCAGACAACGATTTGACAGACAATTTTGATGTTGTTCAAAACAAAGTGGACGCGACAAACATAAAGAGTGTTGAGGAGGTAGTAAAAGATGTTGAAGGGAACAGAGAAGAAGCGGGTGTTAACTTAAACGAGCAACAGTCAGTGGGGTTGCTGAATTCTGGTGGTGATGGAGTTGATTTGCATGGACCCAACTGGAGTTTGGGGGTATCTCAGCATTTTATTTCACAACAGGTTGATCAAACAACAATTGACTATTGCCTTCAACAATTGAATGAGAACGCTACAAATGAAGTTGATCAACAGGGTGATGATAACATGCCCTTGGGAAAAAAAGAAAATTTAGATAACATGAAGGCGGATATTGTGGGTGGCGTGTCCAAAACTGAAGATCCACATACTGTTGGTGAAGCAAAATGGCGTGAGGTGGTTGATAAATTTGAGGCAAACAGAAAAAAACCAATTAGAGACAAAGGTATTGCCGAGGTCAACAAATCTCCATATGTGATAAGAGAAGATGAAAGTATCCTAAGCTATGTATTGTACGAGGATTCTTCAAACAAAGGGTTGTTCACCGATGGACAAAAAAATGACAAAGGGAAGCAGAAAGAAACGTTGAACGATGCAAATGATCACAGACAGAGTGCAGTGGTAAACAATCAAGTTATTGATGCATGGGTTGAAGTCCTAAATTTTGAAGAAAAATACAGATCTCCCAATTCTCCGTACAGATTGTTTTGCGGGAGTAATGTGATCATTGACGGGATGCTCAACCAAGATGATGTTGATCCCAATCAAAGAGTTGATAAGTTCGCTACAAACATGAATGGGGTGATAGCTGGAGTGATTAAGGAGAGTCCTTTTGCTAAGGACAAAGCAGATGTCAACAATCTTAAAATGTTTGATATGGTCCTCTTCCCTATACTTGAATTCAACCATTACTACTTGTTAGTCTTTGAGTTAAAGAACTGTGCGATCTCAGTAATTGATAACTTTCATGAATCAATACCACTAGTGGGGGTTAAAGATAGTGCAGACTATTACCTCAAAGATTCCCCCTGCAAAGTGAAGGAAATGTTTGTCCGTTATCTAGAGAAGATTAAACATGCAAAAACGGATGAAATACATGCAACCAAGATTCAAAAGGTGCAAATCCCATGGGCTACCAAGACTAACGCAGTTGATTGTGGAGTTTTTCTGATGCGACACATGGAAAAATTTATGGGAATCCATGAACAATTCAACTGTGGCTTCTCAACAAATGGCAAGAAAAAAAGTGCCAGCTGA | 4737 | 40.51 | MSSTQSLHSLAFRVMRLCRPTFHAETPLRFDLSDLIVGEDLFDDPSAGPQLRRLIQSQTDSSTDLTYTDRFLLRHDPSDAMGLPGMLVLPQSFGAIYLGETFCSYISINNSSSFEVRDIIIKAEIQTERQRILLLDTTKTPVETIRAGGRYDFIVEHDVKELGAHTLVCTAQYSDGDAERKYLPQYFKFMVSNPLSVRTKVTEMTYLEACLENNTKSNLYMDQVDFEPTSNWSAILLRADSHHSEKSVTTREIFKPPILIKSGGGIHNYLYQLKSLLDGSAPMKFEGSNVLGKLQITWRTNLGEPGRLQTQQIVGNLFTQREIELKAAKVPSVIILEKPFTVYLSLTNLTENKLGPFEVFISRSDSQEEKSLLGTGLKKIALPQVEAFRSLDFQMNLIPLEAGMQKISGITVFNTTEKKSYDPVPDIESLITVIVMSSRKRKSERIAIKSLSKFTNTEEDPIDLDTTDQSKQGRKKNMKQKDPGSDSDLEEEKIRVKMRKKGIALTKDVRLSFTTLWLHCFANGGVFRDVAYYDSDEFVGKDVDNEDRGRKRGKLGLSDTESDEDEILINLKRKVQRQGKKDDVPGKKRGHGSKGTEGKEIWKCEMKKKNGKKKMYASDSEDAKSQKGKEKMYASDSEDVKGQKGKKVMRQTSKKVDATDGSGTKRWMILNTRSSPAQLFRCVKLLRDNQKRGVMEMGFGNLLKFNMDGIPSKMAHFVVDRLKCKRMEIICRGGCLKITPQLIHKQIVEKIESSEDENTFDFKMDFIVLFMAVLVECHKNGRVKEGILRYITSQTDFSEIDWCDYIFECLRSCKIGWARDDNSSPFNGPLTILTLIYVEGFECKGISVDKRIHPIEFWNKNRLKIREDWEMKHGGFGRGKLNQNFVDEGSSGEREEPYEKTELLAGVKKCLDDWGNLKSVLEKDLTYLIARDKNNEDIQTVRACYESLLEKKPKWVRQLDDGENDEDGAEKIELINAFDRDTVVDLNITHPDVGIEDNQFDGASWRLGVSDLTGASTGKNAKADYTGAVSHLDNPVFLSESDNEIIKNGGPVDPTKTSTHLDSSMETEQSVNQFCLSLLNEAPLQDVPGKSNIKETNDHVTRNEENRDGELQGTLHMKLTEQIHGGFQNQAAPDLTEQTVNQFCLSLMNDPPDNDLTDNFDVVQNKVDATNIKSVEEVVKDVEGNREEAGVNLNEQQSVGLLNSGGDGVDLHGPNWSLGVSQHFISQQVDQTTIDYCLQQLNENATNEVDQQGDDNMPLGKKENLDNMKADIVGGVSKTEDPHTVGEAKWREVVDKFEANRKKPIRDKGIAEVNKSPYVIREDESILSYVLYEDSSNKGLFTDGQKNDKGKQKETLNDANDHRQSAVVNNQVIDAWVEVLNFEEKYRSPNSPYRLFCGSNVIIDGMLNQDDVDPNQRVDKFATNMNGVIAGVIKESPFAKDKADVNNLKMFDMVLFPILEFNHYYLLVFELKNCAISVIDNFHESIPLVGVKDSADYYLKDSPCKVKEMFVRYLEKIKHAKTDEIHATKIQKVQIPWATKTNAVDCGVFLMRHMEKFMGIHEQFNCGFSTNGKKKSAS | 1578 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g01816 | 1578 | MobiDBLite | consensus disorder prediction | 459 | 491 | - | - | |
| Mimi16g01816 | 1578 | MobiDBLite | consensus disorder prediction | 612 | 660 | - | - | |
| Mimi16g01816 | 1578 | MobiDBLite | consensus disorder prediction | 612 | 654 | - | - | |
| Mimi16g01816 | 1578 | PANTHER | UNCHARACTERIZED | 1 | 430 | IPR010378 | GO:1990072(PANTHER) | |
| Mimi16g01816 | 1578 | SUPERFAMILY | Cysteine proteinases | 1348 | 1558 | IPR038765 | - | |
| Mimi16g01816 | 1578 | ProSiteProfiles | Ubiquitin-like protease family profile. | 1346 | 1557 | IPR003653 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
| Mimi16g01816 | 1578 | Gene3D | Adenoviral Proteinase; Chain A | 1317 | 1571 | - | - | |
| Mimi16g01816 | 1578 | Pfam | Protein of unknown function (DUF974) | 87 | 313 | IPR010378 | - | |
| Mimi16g01816 | 1578 | MobiDBLite | consensus disorder prediction | 573 | 598 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g01816 | K20310 | trafficking protein particle complex subunit 13 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr15:89229479 | Mimi16g01816 | Mimi-Chr16:77893374 | dispersed | |
| Mimi | Mimi-Chr16:77893374 | Mimi18g00332 | Mimi-Chr18:6445078 | dispersed | |
| Mimi | Mimi-Chr2:50179119 | Mimi16g01816 | Mimi-Chr16:77893374 | dispersed | |
| Mimi | Mimi-Chr8:19260636 | Mimi16g01816 | Mimi-Chr16:77893374 | dispersed | |
| Mimi | Mimi-Chr1:115492414 | Mimi16g01816 | Mimi-Chr16:77893374 | transposed | |
| Mimi | Mimi-Chr4:20156921 | Mimi16g01816 | Mimi-Chr16:77893374 | transposed | |
| Mimi | Mimi-Chr18:28608812 | Mimi16g01816 | Mimi-Chr16:77893374 | transposed | |
| Mimi | Mimi-Chr10:44353506 | Mimi16g01816 | Mimi-Chr16:77893374 | wgd | |
| Mimi | Mimi-Chr16:77893374 | Mimi17g02960 | Mimi-Chr17:92988169 | wgd |