AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g01820 ATGGATCTGAGTAACTTAAACCGCGAAGAGCTTACACTGCTGGGATCTGGTGCTTGCACTATGCTTGCCCTACACTTTTCATCTCAACTTGCTTCACAACATCTTTATTACTGGAAAAATCCAAAGGAACAAAGTGCCATTTTGATGATTATTCTGATGGTTCCTGTTTATGCTGTTTATTCTTTTGTGGGTGTGCTGGATCTCAAGGGAGCCAAGCCTTTTCTCATGGTGTTAACTTTGATTAAGGAATGTTATGAGGCTTTGGTTGTTGCTAAGTTTCTTGGTTTATTGTTTGGCTATATGAATTTGGATATTAACAATAATATAGTTCCTGATGAAGTCAAGGGAAGAGAAATCCGTCATGCATTCCCAGTTTCTCTTTTCCAACGTCGTACAGCTCATTTGAATCACCAAACATTGAAGCTTCTGAAGTACCAGATTTGGCAGTTTGTTGTGACACGACCCATGTGTTCACTTTTAATGATCGGTTTACAGTTACTTGGAGTGTATCCTCGTTGGGTCAGCTGGACGTTTACAATTATTATTAGCATTTCCATTTTCATGGCTGTGTATTCTTTACTAGTCTTTTACCATGTTTTTGCAAAGGAATTGAAGCCTTACAAGCCACTAGCCAAGTTCTCATGCATAATTGGGGTTGTCTTTTTCGGTTATTGGCAGGGGGTGTTGCTGGACATCCTAGAGGAATCAGGTGTCATAAAATCCCATCATTTCTGGCTGGATGCAGAGCATGTTGGGGAAGCGATTCAAAATGTTTTGATTTGTGTTGAGATGGTTGGATTTTCGGTTTTCCAACAATACGCGTTTCATTTTGAACGGTACAGTGGAGATGTTCAAACGATGCTGCAAAAGGGAAAAAGGAACGAGTGA 888 40.09 MDLSNLNREELTLLGSGACTMLALHFSSQLASQHLYYWKNPKEQSAILMIILMVPVYAVYSFVGVLDLKGAKPFLMVLTLIKECYEALVVAKFLGLLFGYMNLDINNNIVPDEVKGREIRHAFPVSLFQRRTAHLNHQTLKLLKYQIWQFVVTRPMCSLLMIGLQLLGVYPRWVSWTFTIIISISIFMAVYSLLVFYHVFAKELKPYKPLAKFSCIIGVVFFGYWQGVLLDILEESGVIKSHHFWLDAEHVGEAIQNVLICVEMVGFSVFQQYAFHFERYSGDVQTMLQKGKRNE 295
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g01820 295 Pfam Organic solute transporter Ostalpha 14 280 IPR005178 -
Mimi16g01820 295 SMART Solute-trans-a-2 12 280 IPR005178 -
Mimi16g01820 295 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 11 285 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g01820 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:77956921 Mimi17g00549 Mimi-Chr17:20361821 dispersed