AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g01824 ATGTGGCGTTTGCTTGTTGCTGGTGTGTTCCATTTTCAAGAACAGCTGTCTAATTACATTCGCTTTGATGATTATTTTGCTTCTCTGTCTTTAAGTGAGTTACGATTATGTCTTTCAGCTTCAACACCTGCAGTTTGGTATGAAAACATATATAAACACAAGTTGTTGATGAGAGAAGCTAAATCATGGAGGAATCTATTGAAAAGACACCTCCATTTTGATTGGGGACGTTATGGAATGAAGATGAAACCGTTTTTGGGAGTTGCATTTATCATAATGCTGTATATTGTGTATAGAACCACAAATTATCAGTATCTCCAGACAGAGGTAAACTCTGCATTTCCTTGTGTTAATAAGTTATTAAAAATGAATGACTATGCCATAGCCTCTACCGGTTTAAGAAGTTTACCTCATGGTATTATTCAAGCTAAATCTGACTTGGAACTAAAGCCTTTATGGTCAACAAGTAGTTCAAAAACAAAGGATGATGTTTCGGGTACACATAACTTGCTGGCCGTTCCAGTGGGTCTCAAACAAAAGCGTAATGTTAATACTATAGTTCAAAAGTTTCTGAAAGAAAATTTTACAGTTATCTTGTTCCATTATGATGGAAAGGTTGATGGCTGGCGGGATCTTGATTGGCATAACAAGGTCATACATATTGTGGCTCATAACCAAACAAAGTGGTGGTTTGCAAAGCGATTTCTGCACCCTGCTGCTGTGTCAATTTATGATTATATATTTCTGTGGGATGAAGACCTAGGAGTTCAGCATTTTAATCCTAGAAGGTATTTGAATATTGTTAAAGCAGAAGGACTGGAAATATCACAGCCAGCTTTAGATCCAAATTCAACTGATATACATCATCGCATCACAATACGGAAGAGAATGAATAAATTGCATAGGAGAGTGTATGACAGCAGAGGCAATGTGAAATGTTTAAATGATAGTGAAGGTCCACCATGTTCTGGATTTGTTGAAGGAATGGTCCCAGTTTTCTCAAGAGCTGCATGGCATTGTGCTTGGCATCTTATTCAGAATGACCTTGTTCATGGATGGGGAATGGATATGAAACTTGGCTACTGTGCACAGGGGGACCGGTCGAAGAAGGTTGGAATTGTTGACAGTGAATATGTCGTTCATCAAGGCATACAAACGTTAGGCGGGGCATCTGCTAAAAAGGTCATCCATTTGGACTATTTTACCCTCAACAGCTTCCGTTTAGGTTATATAATATTAGATCAAATAAGGAGACAATCGACAACTGAGCTTCAAATATTTGAAAAAAGATGGGACAAGGCCGTGAAAGAGGACACATGGTGGGTGGATCCATTCGAAAAAGGGGAACAAATCCGAACCTAG 1362 38.62 MWRLLVAGVFHFQEQLSNYIRFDDYFASLSLSELRLCLSASTPAVWYENIYKHKLLMREAKSWRNLLKRHLHFDWGRYGMKMKPFLGVAFIIMLYIVYRTTNYQYLQTEVNSAFPCVNKLLKMNDYAIASTGLRSLPHGIIQAKSDLELKPLWSTSSSKTKDDVSGTHNLLAVPVGLKQKRNVNTIVQKFLKENFTVILFHYDGKVDGWRDLDWHNKVIHIVAHNQTKWWFAKRFLHPAAVSIYDYIFLWDEDLGVQHFNPRRYLNIVKAEGLEISQPALDPNSTDIHHRITIRKRMNKLHRRVYDSRGNVKCLNDSEGPPCSGFVEGMVPVFSRAAWHCAWHLIQNDLVHGWGMDMKLGYCAQGDRSKKVGIVDSEYVVHQGIQTLGGASAKKVIHLDYFTLNSFRLGYIILDQIRRQSTTELQIFEKRWDKAVKEDTWWVDPFEKGEQIRT 453
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g01824 453 PANTHER OS06G0731900 PROTEIN 88 440 IPR007877 -
Mimi16g01824 453 Pfam Protein of unknown function (DUF707) 130 437 IPR007877 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g01824 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr10:43805244 Mimi16g01824 Mimi-Chr16:78023131 dispersed
Mimi Mimi-Chr16:78023131 Mimi17g01467 Mimi-Chr17:65891647 dispersed
Mimi Mimi-Chr16:78023131 Mimi17g02976 Mimi-Chr17:93296875 wgd