Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g01861 | ATGTGGGAGTTAAAGATAGCAGAAGGAAATGGGCCCTATTCATATAGCACAAATAACTTTGTTGGTAGACAATTCTGGGAATTTAATCCAGATGCTGGAACCTTTGAGGAGAAAGAAGAAGTTGAAAGGCTGCGCGAAAGCTTTAAAAATAGCCGAAGAAATGGAGGATTTCATGCTTGTGGTGATCTGTTGATGCGAAGACAGGAAAATGGAATCGATGTTACAAGCATACCTACAATGAAAGTGAGTGAAAGTGAGCAAGTGGCTATTGAAGTTGTTACAAATGCCGTAAAGAAAGGTGTAAGACTACAACGTGCGATCCAAGCCAAAGATGGACATTGGCCAGCTGAAAATGCAGGCCCCATGTTTTTCACCCCTCCACTTTTAATTGCCTTATACATCAGTGGTACCATTAATACTGTTCTAACGGAAGAACACAAGAAGGAGATGATACGTTACTTCTACAATCATCAGAATAAGGATGGCGGATGGGGATTTTATATCGAAGGCAAGAGCACAATGATTGGATCTGCATTGAGTTATGTAGGTTTACGAATACTTGGAGAAGGTGAAGACGATTATGCAATTGCTAGAGCTCGTAAGTGGATAATTCACCATGGAGGTGCAACCTCTATTCCCTCTTGGGGAAAGGTTTATCTTTCGGTTCTTGGAGTGTATGAATGGGAGGGTTGCAATCCATTGCCACCAGAATTCTGGCTCTTCCCATCAGCCTTTCCTTTTCATCCAGCTGAGATGTGGTGCTACTGTCGGACAACCTACATGCCCATGTCGTATTTATATGGCAAACGAGTTCAAGGGCCAAGAACACCACTTGTTTCATCATTAAGGAAAGAAATACACCCCATCCCTTTTGAGGATATTAATTGGAATAAGCAACGAAACAACTGTTGTAAGGAGGATTTCTACTATCCACATTCATTTCTTCAAGATGCACTCTGGCATAGTCTTCATTACCTTACTGAGCCGGTTCTCAAGTATTGGCCGTTTTCGAAACTTAGGCAGAGATCTATTGACAAAGTTGTTGAACTAATGCGCTACGAATCAGAAGAGACTAGATATATGACCATAGGATGTGTTGAAAAAAGTCTACAAATGATGTGTTGGTGGGCAGAGAATCCAAATGGGGATGAATTCAAATATCACCTAGCTAGAGTACCAGATTACCTATGGATCGCGGAAGATGGAATGACAATGCACAGTTTTGGTAGTCAAGTGTGGGATTGCACTCTTGCAGTTCAAGCAATTACTGCAAGCAATATGGTTGAGGAATATGGTGATTGTCTCAAAAAGGCCCACTTCTACTTGAAGGAATCACAGGTTGTGAAAGAAAATCCTTCAGGTGATTTCATTAAAATGTGTCGACAGTTCACAAAAGGATCATGGACTTTCTCTGATCAAGATCACGGATGGACTGTCTCAGATTGTACATCAGAGGCACTAAGGTGTCTGATGTTATTATCACACATGCCTAAAGAAATAGCCGGAGACAAGGATGATCCTGCCCGACTCTATGATGCAGTGAACGTGCTACTATACTTGCAAAGTCCTATAACTGGAGGATTTGCTGTTTGGGAGCCACCAGTTCCAAAACCATTTCTACAGCTTCTGAATCCTTCAGAGATTTTTGCAGATATTGTTGTAGAGAAAGAGCATGTGGAAACCACATCCTCTATTATCGGAGCTCTGGTAGAATTCACTTGTCTCCACCCAAGACACAGAAAGGATGAAATAGCACTTTCGATTTCAAAAGGAGTACGGTATCTTGAGGAAACCCAATGGCTTAATGGTTCATGGTATGGTTACTGGGGTGTATGCTTCATATATGGAACATTTTTTGCTTTAAGGGGTTTAAGTTCCACCGGATTGACATACGATAACAATGAAGCAGTCCGTAAAGGTGTCGAGTTCTTACTTTCAATACAGAATGAAGAAGGGGGTTGGGGAGAAAGTCATATATCTTGCCCTACTGAGGTATATACACCATTGGAAGGAAACCGAACAAATCTGGTGCAAACATCCTGGGCTATGCTTGGTCTTATGTTTGGCGAACAAGTCGAAAGAGATCCAACGCCTTTACACAAAGCCGCAAAGCTGTTGATTAACGCTCAAATGGATGATGGAGATTTTCCTCAACAGGAAATTACAGGAGTATACATGAAGAATTGTCTGCTGCTTTATGCACAATACAGAAACATATTTCCACTCTGGGCACTCGGAGAGTATCGTAAGCGTGTCTGGGGGATATAA | 2268 | 41.71 | MWELKIAEGNGPYSYSTNNFVGRQFWEFNPDAGTFEEKEEVERLRESFKNSRRNGGFHACGDLLMRRQENGIDVTSIPTMKVSESEQVAIEVVTNAVKKGVRLQRAIQAKDGHWPAENAGPMFFTPPLLIALYISGTINTVLTEEHKKEMIRYFYNHQNKDGGWGFYIEGKSTMIGSALSYVGLRILGEGEDDYAIARARKWIIHHGGATSIPSWGKVYLSVLGVYEWEGCNPLPPEFWLFPSAFPFHPAEMWCYCRTTYMPMSYLYGKRVQGPRTPLVSSLRKEIHPIPFEDINWNKQRNNCCKEDFYYPHSFLQDALWHSLHYLTEPVLKYWPFSKLRQRSIDKVVELMRYESEETRYMTIGCVEKSLQMMCWWAENPNGDEFKYHLARVPDYLWIAEDGMTMHSFGSQVWDCTLAVQAITASNMVEEYGDCLKKAHFYLKESQVVKENPSGDFIKMCRQFTKGSWTFSDQDHGWTVSDCTSEALRCLMLLSHMPKEIAGDKDDPARLYDAVNVLLYLQSPITGGFAVWEPPVPKPFLQLLNPSEIFADIVVEKEHVETTSSIIGALVEFTCLHPRHRKDEIALSISKGVRYLEETQWLNGSWYGYWGVCFIYGTFFALRGLSSTGLTYDNNEAVRKGVEFLLSIQNEEGGWGESHISCPTEVYTPLEGNRTNLVQTSWAMLGLMFGEQVERDPTPLHKAAKLLINAQMDDGDFPQQEITGVYMKNCLLLYAQYRNIFPLWALGEYRKRVWGI | 755 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g01861 | 755 | FunFam | Terpene cyclase-mutase family member | 384 | 754 | - | - | |
| Mimi16g01861 | 755 | SUPERFAMILY | Terpenoid cyclases-Protein prenyltransferases | 333 | 753 | IPR008930 | - | |
| Mimi16g01861 | 755 | PANTHER | TERPENE CYCLASE-MUTASE FAMILY MEMBER | 1 | 752 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016104(PANTHER)|GO:0016866(InterPro)|GO:0042300(PANTHER) | |
| Mimi16g01861 | 755 | SFLD | Prenyltransferase Like 2 | 84 | 751 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Mimi16g01861 | 755 | Pfam | Squalene-hopene cyclase N-terminal domain | 105 | 356 | IPR032697 | - | |
| Mimi16g01861 | 755 | Gene3D | - | 118 | 408 | - | - | |
| Mimi16g01861 | 755 | SUPERFAMILY | Terpenoid cyclases-Protein prenyltransferases | 120 | 405 | IPR008930 | - | |
| Mimi16g01861 | 755 | CDD | SQCY-1 | 97 | 748 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Mimi16g01861 | 755 | Gene3D | - | 485 | 721 | - | - | |
| Mimi16g01861 | 755 | NCBIfam | squalene-oxidosqualene cyclases | 97 | 750 | IPR018333 | GO:0005811(InterPro)|GO:0016104(InterPro)|GO:0016866(InterPro) | |
| Mimi16g01861 | 755 | Pfam | Squalene-hopene cyclase C-terminal domain | 410 | 750 | IPR032696 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g01861 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:78732316 | Mimi17g02566 | Mimi-Chr17:86286268 | dispersed | |
| Mimi | Mimi-Chr16:78732316 | Mimi17g01854 | Mimi-Chr17:74043006 | transposed |