AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g01866 ATGAAACTAACAATATCCGAACCCACTACCGTCAGCAACCCGACTTCCGAACGTTCTCCGACTCCAAATGCCCGTAAGCTCAGAAACGGTAGCTCCCAACTGAACCGCTGGTCCAGAGCTCGAGTCATCAGGTCTGGCCGTAGGCTGGACCGCCCTGGTCAACCTAAACAACCGAACAACACAGAAATCGCTGATCCACAGCTCATTCGGTCAGAAGGAGGTGATCCGTCTATAACTACTACTAGCATGTGTTTCTCGTCTTCGTCATCGGAAGATGACACCGGAGGAAGAACGGATGAAGCAGTCGTTAAAGGGAAGGAGATATATTTGGTTTCCGACGGATCAGGACGCACGGCGGAGCACTCCGTCACCGCCGCCTTGGGTCAATTTGAACATTTTCTGATTGACGGTGGTTGTCCGGTTTATACTCGCTTGTTTTCTGGGATTAATGATTCAGACCGGCTTATGGAGATCATAATGCAAGCAGCCAAAGAGGATGCAATCTTTATTTACACATTAGCTGATGAAAAACTAGCTGATTCAGCTCGACACGCCTGCAAATTATGGGGTGTACAATCAACAGATGTTCTTAGACCAATCACAGATGCAATTGCATCCTATTTAGGAATTTCACCTTCCAGGCTTCCTCGTGGAGCCCTTGGGAGGCGATTTCCCCTAACCGAAGAATACTTTAAGCGAATTGATGCTATTGAATTTACCATAAAACAAGATGATGGTGCTTTGTCACAGAACTTAAATAAGGCTGATATTGTTGTTGCTGGTGTATCGCGATCCGGAAAGACTCCATTGTCAATTTATTTGGCACAGAAAGGATTCAAAGTGGCAAATGTGCCTATTGTTAAAGGTGTTGACTTGCCTAAGACTTTGTTTGAGATTGACCAGAAAAAAGTGTTTGCTTTGACTTTGAATCCTGTTGTATTGCAAACTATAAGACTAGCAAGAGCAAAGTGTTTAGGGTATGTTGAAGATGAGATAAGTGAGTATGCAGAGATGGTTCATGTCAGAGAGGAGGTGGATTATGCTAACAAGATTTTCAGACAAAATCCTACTTGGCATGTTATCGTTGATGGTGATCCGGTGGCGGCGGCGTTGGCAGTAGCAGCAGTAATGATGGTTATTTGGTGGTGGCGTTGTGGGTCGATTGTTCCTATGGATGCTGGTATCGATGTTTCCGGCATGTTGCCTGTTACAAGTTGA 1218 45.24 MKLTISEPTTVSNPTSERSPTPNARKLRNGSSQLNRWSRARVIRSGRRLDRPGQPKQPNNTEIADPQLIRSEGGDPSITTTSMCFSSSSSEDDTGGRTDEAVVKGKEIYLVSDGSGRTAEHSVTAALGQFEHFLIDGGCPVYTRLFSGINDSDRLMEIIMQAAKEDAIFIYTLADEKLADSARHACKLWGVQSTDVLRPITDAIASYLGISPSRLPRGALGRRFPLTEEYFKRIDAIEFTIKQDDGALSQNLNKADIVVAGVSRSGKTPLSIYLAQKGFKVANVPIVKGVDLPKTLFEIDQKKVFALTLNPVVLQTIRLARAKCLGYVEDEISEYAEMVHVREEVDYANKIFRQNPTWHVIVDGDPVAAALAVAAVMMVIWWWRCGSIVPMDAGIDVSGMLPVTS 405
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g01866 405 MobiDBLite consensus disorder prediction 1 39 - -
Mimi16g01866 405 PANTHER PYRUVATE, PHOSPHATE DIKINASE REGULATORY PROTEIN 1, CHLOROPLASTIC 12 361 IPR005177 GO:0005524(InterPro)|GO:0016772(InterPro)
Mimi16g01866 405 Pfam Kinase-pyrophosphorylase 108 361 IPR005177 GO:0005524(InterPro)|GO:0016772(InterPro)
Mimi16g01866 405 MobiDBLite consensus disorder prediction 73 92 - -
Mimi16g01866 405 MobiDBLite consensus disorder prediction 1 99 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g01866 K20115 [pyruvate, phosphate dikinase]-phosphate phosphotransferase / [pyruvate, phosphate dikinase] kinase [EC:2.7.4.27 2.7.11.32]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:78854963 Mimi17g03032 Mimi-Chr17:94068140 dispersed
Mimi Mimi-Chr16:78854963 Mimi17g03017 Mimi-Chr17:93867223 wgd