Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g01866 | ATGAAACTAACAATATCCGAACCCACTACCGTCAGCAACCCGACTTCCGAACGTTCTCCGACTCCAAATGCCCGTAAGCTCAGAAACGGTAGCTCCCAACTGAACCGCTGGTCCAGAGCTCGAGTCATCAGGTCTGGCCGTAGGCTGGACCGCCCTGGTCAACCTAAACAACCGAACAACACAGAAATCGCTGATCCACAGCTCATTCGGTCAGAAGGAGGTGATCCGTCTATAACTACTACTAGCATGTGTTTCTCGTCTTCGTCATCGGAAGATGACACCGGAGGAAGAACGGATGAAGCAGTCGTTAAAGGGAAGGAGATATATTTGGTTTCCGACGGATCAGGACGCACGGCGGAGCACTCCGTCACCGCCGCCTTGGGTCAATTTGAACATTTTCTGATTGACGGTGGTTGTCCGGTTTATACTCGCTTGTTTTCTGGGATTAATGATTCAGACCGGCTTATGGAGATCATAATGCAAGCAGCCAAAGAGGATGCAATCTTTATTTACACATTAGCTGATGAAAAACTAGCTGATTCAGCTCGACACGCCTGCAAATTATGGGGTGTACAATCAACAGATGTTCTTAGACCAATCACAGATGCAATTGCATCCTATTTAGGAATTTCACCTTCCAGGCTTCCTCGTGGAGCCCTTGGGAGGCGATTTCCCCTAACCGAAGAATACTTTAAGCGAATTGATGCTATTGAATTTACCATAAAACAAGATGATGGTGCTTTGTCACAGAACTTAAATAAGGCTGATATTGTTGTTGCTGGTGTATCGCGATCCGGAAAGACTCCATTGTCAATTTATTTGGCACAGAAAGGATTCAAAGTGGCAAATGTGCCTATTGTTAAAGGTGTTGACTTGCCTAAGACTTTGTTTGAGATTGACCAGAAAAAAGTGTTTGCTTTGACTTTGAATCCTGTTGTATTGCAAACTATAAGACTAGCAAGAGCAAAGTGTTTAGGGTATGTTGAAGATGAGATAAGTGAGTATGCAGAGATGGTTCATGTCAGAGAGGAGGTGGATTATGCTAACAAGATTTTCAGACAAAATCCTACTTGGCATGTTATCGTTGATGGTGATCCGGTGGCGGCGGCGTTGGCAGTAGCAGCAGTAATGATGGTTATTTGGTGGTGGCGTTGTGGGTCGATTGTTCCTATGGATGCTGGTATCGATGTTTCCGGCATGTTGCCTGTTACAAGTTGA | 1218 | 45.24 | MKLTISEPTTVSNPTSERSPTPNARKLRNGSSQLNRWSRARVIRSGRRLDRPGQPKQPNNTEIADPQLIRSEGGDPSITTTSMCFSSSSSEDDTGGRTDEAVVKGKEIYLVSDGSGRTAEHSVTAALGQFEHFLIDGGCPVYTRLFSGINDSDRLMEIIMQAAKEDAIFIYTLADEKLADSARHACKLWGVQSTDVLRPITDAIASYLGISPSRLPRGALGRRFPLTEEYFKRIDAIEFTIKQDDGALSQNLNKADIVVAGVSRSGKTPLSIYLAQKGFKVANVPIVKGVDLPKTLFEIDQKKVFALTLNPVVLQTIRLARAKCLGYVEDEISEYAEMVHVREEVDYANKIFRQNPTWHVIVDGDPVAAALAVAAVMMVIWWWRCGSIVPMDAGIDVSGMLPVTS | 405 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g01866 | 405 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
| Mimi16g01866 | 405 | PANTHER | PYRUVATE, PHOSPHATE DIKINASE REGULATORY PROTEIN 1, CHLOROPLASTIC | 12 | 361 | IPR005177 | GO:0005524(InterPro)|GO:0016772(InterPro) | |
| Mimi16g01866 | 405 | Pfam | Kinase-pyrophosphorylase | 108 | 361 | IPR005177 | GO:0005524(InterPro)|GO:0016772(InterPro) | |
| Mimi16g01866 | 405 | MobiDBLite | consensus disorder prediction | 73 | 92 | - | - | |
| Mimi16g01866 | 405 | MobiDBLite | consensus disorder prediction | 1 | 99 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g01866 | K20115 | [pyruvate, phosphate dikinase]-phosphate phosphotransferase / [pyruvate, phosphate dikinase] kinase [EC:2.7.4.27 2.7.11.32] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:78854963 | Mimi17g03032 | Mimi-Chr17:94068140 | dispersed | |
| Mimi | Mimi-Chr16:78854963 | Mimi17g03017 | Mimi-Chr17:93867223 | wgd |