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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g01896 ATGGAATCCTCAACCATTCTTCCACTGTCTCACGTTTCTATTTTCTATCATAAACCCCATGGAACAAATATTGGAGCTTTTCCTTGTAATTTTAAAAGATTCAAGCGATCATCATCTACCATCACTGTTTCAAATTGTCAAAAGATGCATGTCTCAGGATTTGGAGAAGCATCACCAGAAAGCAAAGCAGCAAAAAATCTCCACAATTTCTTTACATATGTTGCAGTCAGAGTTGTCACTGCACAGCTTGAGAGCTACAATCTTGAGGCCTATAAGGAGTTGATGGAGTTTCTGGACAGACACTCTTTGAATGATGGTGATAAATTCTGTGCAGCGTTAATGCGTGAATCATCAAGGCATAAAACCCTAGCTATGAGAATATTGGAAGTTCGATCTGCATACTGCAAAAAAGATTTTGAGTGGGACAATTTACAGCGGTTAGCGAAAAAGATGGCTGATGAATCTAACACAAGACTTATGAGGGATTACGTGTTGGAAACAAGTCATGTAGAAAACGAAAACTCTGATGGATAA 534 38.39 MESSTILPLSHVSIFYHKPHGTNIGAFPCNFKRFKRSSSTITVSNCQKMHVSGFGEASPESKAAKNLHNFFTYVAVRVVTAQLESYNLEAYKELMEFLDRHSLNDGDKFCAALMRESSRHKTLAMRILEVRSAYCKKDFEWDNLQRLAKKMADESNTRLMRDYVLETSHVENENSDG 177
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g01896 177 SUPERFAMILY RbcX-like 56 175 IPR038052 -
Mimi16g01896 177 Gene3D - 49 176 IPR038052 -
Mimi16g01896 177 PANTHER CHAPERONIN-LIKE RBCX PROTEIN 1, CHLOROPLASTIC 31 175 IPR003435 GO:0044183(InterPro)|GO:0110102(InterPro)
Mimi16g01896 177 Pfam RbcX protein 62 166 IPR003435 GO:0044183(InterPro)|GO:0110102(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g01896 K27935 RuBisCO chaperone RbcX