AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02043 ATGAAAGCACCTGAATCGGGTCACAATGCCGGGCCTGGATTTCCTGAAACGGGTCCGGAGCCGAAACACCGCAATGACGGTGGCGCCAGGGCGGAAATCGACACATCAGCGCCGTTTGAGTCTGTGAAGGAGGCCGTTTCCCGGTTCGGTGGGATCGGGTTCTGGAAACCCCATCATAAGGCTTCTGAGGATGTCATTGAAGAAGAATTTGATGCTGCTAAAGCAGAAGAGCAGGCTCTGCAGCTGGCAAACGATCTGGTTGTGAAAGAGAGGGAAACATTAGAAGTCTTGAAAGAACTAGAAGCTACAAAAGCGACTGTTGAAGAGTTAAAAGTTAAACTACAGAAAGAATCTGCTATGATCAGCCTAACAGTCAGCGATCAGGACTCGAGAGAGGAAATTGACAATAATACTCTTGAAACACAATCAGCTGACAACAGTTTGATGTGCCCTTCTTCTGCTCCAGGTCTCATCTTGATGGAACTGAAGCAAGCTAAACTGAACTTAACAAGGACAACAAGTGATCTTGCTGACATCAGATCAACTGTTGAAGCATATAACAAAATGATCGAGAAAGAAAGATTGGAATTAGAGAAAACCCGTATAAGATTATCCTCGTATTCTTCAAAAGCTTCAAACTTTAAACCGGATGTTGACTTTCCGAAGGAGATCCTTAGGTTGACTTATGAAACAGATGAGTTCAAAAGGGTTGGAGAGGTAGCAAAATCAGAAGTTTTAAGAGCAATGAATCAAATCAAACAAACAAAAAGGAATCTTAAAACAGCTGAAATCCGTCTAATTGCTGCTAGAAAGATGAAGGAAGCTGCTAGAGCGACTGAAGCGCTTGCTCGATCGGAAATTAAGTCAATATCAAAAAGTCAAACTTTATCAGAAGGTGAAGGGGTTACTCTTACGTTTGAAGAATACTCTAGTTTAAAATTGAGAGCTCAAGAGGCAGATGAAGCTTTAGTTAGAAAAGTCAACGAATCAATAGTTAAAGTCAATGAATCAGAGTTCTCAAGATCAGATATCTTGAATAGGGTGGAGGAAGCAGCAGAAGAAGTGAAGAACAGCAAGAAGGTTTTAGAAGAAGCTTTGAGTAAAGTAGAAGCTGCTAATAAAGAGAAACTAAAAGCAGAAGAAGCTCTTAGAAAATGGCGGTCAGATCATGGTCAAAAACGAAAGTCAACTGTTCAAAGTGCAACCAAGTTCAAGAATGCTTCTTGCAGGACCACCAACACACGTTTGTTGGATGTAAACGGGGCCCATTTGGGAAGTAACATATCTGGCCCGGTTTTGAGGCCAGCAATGTCAATTGGACAGATTTTGAGTCGGAAGTTGCTTTTGACCGAAGAGTATTCTGGCAAAACAGAGATGAAAAAGAAGGTTTCTTTGGCACAAATGTTGAAAAAACCAACCAACAATGGTGGTGGCGGTTATGGTGGTGGAGATGACGGTGATGGTAAACGACGATCTGGAAAGAGAAAGAAGTTTGGGTTTGGTAAGATCTCGTTTCTGGTGGCGAAGCCTAGCAAGAAGAAGAAACATAGCATCAGTTCCAGACTTTCTTGTGCCACTGATTAG 1584 42.17 MKAPESGHNAGPGFPETGPEPKHRNDGGARAEIDTSAPFESVKEAVSRFGGIGFWKPHHKASEDVIEEEFDAAKAEEQALQLANDLVVKERETLEVLKELEATKATVEELKVKLQKESAMISLTVSDQDSREEIDNNTLETQSADNSLMCPSSAPGLILMELKQAKLNLTRTTSDLADIRSTVEAYNKMIEKERLELEKTRIRLSSYSSKASNFKPDVDFPKEILRLTYETDEFKRVGEVAKSEVLRAMNQIKQTKRNLKTAEIRLIAARKMKEAARATEALARSEIKSISKSQTLSEGEGVTLTFEEYSSLKLRAQEADEALVRKVNESIVKVNESEFSRSDILNRVEEAAEEVKNSKKVLEEALSKVEAANKEKLKAEEALRKWRSDHGQKRKSTVQSATKFKNASCRTTNTRLLDVNGAHLGSNISGPVLRPAMSIGQILSRKLLLTEEYSGKTEMKKKVSLAQMLKKPTNNGGGGYGGGDDGDGKRRSGKRKKFGFGKISFLVAKPSKKKKHSISSRLSCATD 527
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02043 527 Coils Coil 97 120 - -
Mimi16g02043 527 Coils Coil 72 92 - -
Mimi16g02043 527 MobiDBLite consensus disorder prediction 1 37 - -
Mimi16g02043 527 Coils Coil 176 203 - -
Mimi16g02043 527 Pfam Weak chloroplast movement under blue light 31 117 IPR008545 -
Mimi16g02043 527 Pfam Weak chloroplast movement under blue light 166 393 IPR008545 -
Mimi16g02043 527 Coils Coil 345 389 - -
Mimi16g02043 527 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 31 127 - GO:0005829(PANTHER)|GO:0009903(PANTHER)|GO:0009904(PANTHER)
Mimi16g02043 527 MobiDBLite consensus disorder prediction 385 405 - -
Mimi16g02043 527 MobiDBLite consensus disorder prediction 470 497 - -
Mimi16g02043 527 Coils Coil 245 272 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02043 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3981820 Mimi Mimi16g02043 Mimi-Chr16:82022219 Mimi18g00547 Mimi-Chr18:11871322
4012922 Mimi Mimi3g02133 Mimi-Chr3:77115488 Mimi16g02043 Mimi-Chr16:82022219
4032030 Mimi Mimi16g02043 Mimi-Chr16:82022219 Mimi17g01274 Mimi-Chr17:61212255