Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g02048 | ATGGGCAATTACAGGTTCAGATTCTCAAATATCATCCCCAATTCTTGGTTTTACAGCTCCATCACAGGTAACAAAGTCAAGAACAAATTGACCAAAACCCAACCAATCTCAACTTCATCATCGTCTTCGTTTCCATCTGCACAATCGCCGAATTACCAAAGAAAATCATACTACTTCACTAGAGAGCTAATTCAACCCGACCCGAAGGTTCGTACTCGGGATTTTCCACCAACTGACACTCAAAAACCCGACCCGAGAAGAAAGTCATCCAAGAAAAAAAGACCCATTTCCCCGAAGAAACAAATTCGCCGGAAATTGGTCTCGCCGGAACTCAATCCGGCCGGCAGGATCACACCAGAGTCCGGTTCGACGGGATTCAATTCCTCCGATACGGAAGTCATGTCGCCTGACCACTCTCTAAGTTGCTCGTGCAAAACCACCAACTCATACGACGACGTTTATGGGAAAGTTGACCTCCCGCCGATTATAACAAAACCCGCGAAACACGAGGAATTCGGGTCGGGTAAATGGGTGATTGACGGAGGAAAGCAGGGTTTAACGGTGAAGGTTGCAAAAGACGGCATTACACGCAGTCCCGTTAGAAAACTGAAAGGAAACGGTTACTCGCCGAGGTTAGGGAACCGGGTCCGGGTAAACGGGATAAACGGTGGCAGGAGAAAGAACGGAAGTCGCCGGAGCTTGTCGGAAAGTATGGCGGTTGTGAAAACATCGGTGGATCCCGGGAGGGATTTTAGAGAATCGATGGTTGAGATGATAACGGTGAGTAAGATGAAGAGTTCGAAAGATTTGGAAGATCTTCTTGCATGCTATCTTGCATTGAATTCTGATGAATATCATGAGCTGATCATCAACGTATTTAAGCAAATTTGGTTTGAATGTACAGATATTAGACTGTAG | 918 | 46.08 | MGNYRFRFSNIIPNSWFYSSITGNKVKNKLTKTQPISTSSSSSFPSAQSPNYQRKSYYFTRELIQPDPKVRTRDFPPTDTQKPDPRRKSSKKKRPISPKKQIRRKLVSPELNPAGRITPESGSTGFNSSDTEVMSPDHSLSCSCKTTNSYDDVYGKVDLPPIITKPAKHEEFGSGKWVIDGGKQGLTVKVAKDGITRSPVRKLKGNGYSPRLGNRVRVNGINGGRRKNGSRRSLSESMAVVKTSVDPGRDFRESMVEMITVSKMKSSKDLEDLLACYLALNSDEYHELIINVFKQIWFECTDIRL | 305 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g02048 | 305 | MobiDBLite | consensus disorder prediction | 66 | 137 | - | - | |
| Mimi16g02048 | 305 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 238 | 299 | IPR006458 | - | |
| Mimi16g02048 | 305 | MobiDBLite | consensus disorder prediction | 87 | 101 | - | - | |
| Mimi16g02048 | 305 | ProSiteProfiles | OVATE domain profile. | 240 | 299 | IPR006458 | - | |
| Mimi16g02048 | 305 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 38 | 300 | IPR038933 | GO:0045892(InterPro) | |
| Mimi16g02048 | 305 | MobiDBLite | consensus disorder prediction | 117 | 137 | - | - | |
| Mimi16g02048 | 305 | Pfam | Transcriptional repressor, ovate | 244 | 299 | IPR006458 | - | |
| Mimi16g02048 | 305 | MobiDBLite | consensus disorder prediction | 32 | 51 | - | - | |
| Mimi16g02048 | 305 | MobiDBLite | consensus disorder prediction | 66 | 86 | - | - | |
| Mimi16g02048 | 305 | Pfam | DNA-binding domain | 1 | 19 | IPR025830 | GO:0003677(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g02048 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3981825 | Mimi | Mimi16g02048 | Mimi-Chr16:82221104 | Mimi5g01291 | Mimi-Chr5:68817567 | |
| 4023056 | Mimi | Mimi12g00334 | Mimi-Chr12:6385697 | Mimi16g02048 | Mimi-Chr16:82221104 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Mimi | Ovate | 1e-22 | No_clan | TF | OFP |