AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02068 ATGAGTTTTACCGCCACCACCGAAGATTTTATCAGTATGCAGGTGAAGTTGGACAGGCTTTCTGCTGGATCAACGAAATCTGCAAAAAGCATATTAGATGATTTACTTTCATCTAATGTAGGGGAAAATCATGACTATGACTGGCTCTTGACTCCTCCAGAAACTGCTTTACTTCCATCTTCAAATGGAAAAGAAACTCAGCCAAAATCAGTTGCCACAAGAAGAAATTTTTTAGTTAGATCAGGCTCTACAAACAGAACCTCAAAGCTTTCTGTTTCTCAATCTGTGGGTAACCATCTAGCAACACCAGCAAGAAGCAGTTCAGTAAGTCGTCCATCAGTCTCTACAGCCCAAAACACCAGCTCTGCTTCTGTCTCTTCTCACAGAAGACCTTCCACCCCAACTAACCGTTCACCATCAGCCGCCAGACCATCCATCGCTTCTTCTCGTCCAACACCTTCTAAAAGCCGCACATCCTCCAACACCACCATTAGACCATCAACTCTTACTCCCCATCCTCAATCACATACTGTTCAGCCAGCTTCTAGGCCATCAACTCCAACTCATAGCAACCCTACATCTTTTAAGAACCGAAGTGTGGGATCCACGCCAAACTCTTCTGTCTCACGGGCCAGGGGCCCACCACAAGCCTTCAATCTTCTTGATTTCCCAAATGAAACGCCACCAAATCTCAGGACAAGTATGCCAGAAAGGCCTGTTTCTGCTGGTAGGTTCAGGCCAAGTGCTGCCATGACTGTGAAGGGAAATGTGGAGTATACTAACATGAGGAAACAGTCATCACCCATTGTCACTAGGGGACGACTTGCAGAACCATCTGGACGGGTGCGGTTACATGCTAACGTGCATTTGGTTGAATCAATTACAAGAAAACCAATAAAAGTGTTAAATTCAGAGAATGTTACAGGGTTTAGGATGAGTACATCAAAGAAATCATTTGACATGGCCATAAAACATATGGATATAAGAACCAGAGGTGCGCGTCCACTTCCTGGGTCAACACGCTTTCCTGAAAGCATTCGATCGAGCCATGGTTCAAGTGCAAGCAACAATCTTAACTCTAATTATGGCAATTTCAAAAACGGCTATTCGATGAAACCCGTAAGCATAGATTATAAAAGTCCATGTCATTCTAAACTAACACAAGTAGACGTATACGAGAGCTTGAGGTATGACTCGATTTTACTAAAAGAAGATTTGAAGAACACAAGTTGGCTGCACAGTGCAGATGAAAATAGTGATCAAAGTCCATTGTTTGATCATGGATTCGAGTCACTCCCTGAACCTTTTGCCCCCTTGTGA 1320 43.64 MSFTATTEDFISMQVKLDRLSAGSTKSAKSILDDLLSSNVGENHDYDWLLTPPETALLPSSNGKETQPKSVATRRNFLVRSGSTNRTSKLSVSQSVGNHLATPARSSSVSRPSVSTAQNTSSASVSSHRRPSTPTNRSPSAARPSIASSRPTPSKSRTSSNTTIRPSTLTPHPQSHTVQPASRPSTPTHSNPTSFKNRSVGSTPNSSVSRARGPPQAFNLLDFPNETPPNLRTSMPERPVSAGRFRPSAAMTVKGNVEYTNMRKQSSPIVTRGRLAEPSGRVRLHANVHLVESITRKPIKVLNSENVTGFRMSTSKKSFDMAIKHMDIRTRGARPLPGSTRFPESIRSSHGSSASNNLNSNYGNFKNGYSMKPVSIDYKSPCHSKLTQVDVYESLRYDSILLKEDLKNTSWLHSADENSDQSPLFDHGFESLPEPFAPL 439
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02068 439 PANTHER GASTRIC MUCIN-LIKE PROTEIN 10 422 - GO:0043622(PANTHER)|GO:0055028(PANTHER)
Mimi16g02068 439 MobiDBLite consensus disorder prediction 331 358 - -
Mimi16g02068 439 MobiDBLite consensus disorder prediction 54 242 - -
Mimi16g02068 439 MobiDBLite consensus disorder prediction 342 358 - -
Mimi16g02068 439 MobiDBLite consensus disorder prediction 55 213 - -
Mimi16g02068 439 MobiDBLite consensus disorder prediction 414 439 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02068 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129590 Mimi16g02068 Mimi5g01658
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3981842 Mimi Mimi16g02068 Mimi-Chr16:82631769 Mimi5g01658 Mimi-Chr5:75140331
4008940 Mimi Mimi16g02068 Mimi-Chr16:82631769 Mimi18g01275 Mimi-Chr18:34116350