AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02081 ATGGGACGGAAGAAGGTAGAAGAAAGGGGAAACGTGAAGGCCACCGTTTATGGGCTACTCAAATGGGCCAAGCCTGCTCAAAAAGCCGGCACGAGAAAACACAGGCCACAGGCCCACAACCTCGGTGGCTCGGTCTCACTCGCAAGTCGAGCATCTGCTTCTATATCTGCACGCACACAAATTGATTCATCGTGTTCGCAGCATCAAATACTGCACAAGATCTGTAGGTGTGCGCTAACAATGGCGCATAAATACCATAACTTCTTAACCTGCTACTTCGTTTTCATAGCCTTCACTATTAACACGACGGTTAAACTCGTTTCCGCCGATGCGATCCAAGGTTGCGGTGGTTTTATCGAGGCGAGCTCATCTTTGATCAAATCGAGGAAACCGACTGATGCAAAATTGGATTATTCGCATATCACGGTAGAGTTGCGTACTTTGGATGGACTGGTGAAGGATCGAACTCAATGTGCTCCTAATGGTTACTACTTCATCCCTGTTTATGATAAGGGTTCTTTTGTAATAAAAATTAAGGGACCAGAAGGATGGTCATGGGACCCAGATCAGGTTCCCGTGCTTGTTGATCATACTGGCTGTAATGCAAATGAAGATATAAATTTTCGGTTTACAGGGTTCGGTATTAGTGGAAAAGTTGTGGGAGCAATTGGCGGTGCAAGTTGTAAATCTAAAGATGGTGGTCCTTCAAATGTAAACGTTGAACTTTTGAATTCCAATGGGAATGTTGTATCTTCTGTTTTTACATCAGCAGCTGGAAGTTATTCTTTCACCAATATTATTCCAGGACTATATAACCTACGGGCATCCCATGATGACTTAAATATTGAAGTTAAAGGTTCAGCAGAGGTTATTGAATTGGGATTTGGAAATAGCCAAGTTGATGATGTCTTTTTTGTCACTGGTTATGATATTCGTGGATCGGTAGTTGCACAGGGAAACCCTATTTTGGGGGTCCACTTCTATCTGTACTCTGATGATGTTAAAGAAGTGCACTGCCCACAGGGTTCCGGTAACCCATCTGGAGATAGAACTGCTCTTTGTCATGCAATATCCGATGTTGGTGGAACATTTAAATTTAAGTCAATCCCATGCGGTAGTGTTTATGAGCTTATACCTTACTATAAGGGTGAAAATACAATTTTTGATGTTTCCCCTCCCTCTGCCATTGTGATTGTTCAGCATGGTCATGCAACAGTATCTGAAAAGTTTCAGGTTACTGGGTTTTCTGTTGGGGGCCGTGTTATTGATTCTGTTGGCAAGGGAGTAAGTGGTGTAAAAATTGTGGTGGATGGCATTGAGAGGTCCATTACTGATAAAGAAGGATATTATAAGCTTGACCAGGTTACATCTAAACAATATCTGATTGAAGCGAAAAAGGAGCACTACAAGTTTGACAAATTGATCAACTTCATGGTTTTACCAAATATGGCATCAGTTGCTGATATCAAAGCTGTATATTATGATGTTTGTGGCTCAGTGCACACAGTTGATTCTGGTTACGGAGTAAAAGTGGCTCTGACTCATGGACCAGATAATGTTATGCCACAAACGAAAAAAATTGATGATAATGGCTATTTCTGCTTTGAGGTTCCACCTGGTGACTATCGATTATCGGCTATTGCAGCCACGCCGGAAGCTACTCCGCATCTTCTATTTTCACCACCACATATTGATGTCAATGTCAATGGTCCATTGCTGTCACTGAAATTTTCCCAGGCACAAGTTAATGTAGGTGGCTCGGTAACTTGCAAAGAGAAATGTGACTCATCTGTTTCTGTTGATCTCGTGAGATTAGATGCTAAAAGCAATGAAAAAAGGCAGACAGTTGGTTTGACCGATCAAAGTAGTGAATTTTTGTTTCAAAATGTCATACCTGGAAACTATAAGCTTGAGGTTAAACACCTTTCTAAAGAAGCTAAATCTGAAGAAGATAAATGGTGTTGGGAACAGAGCTCGGTACCTCTTAATGTTGGAACAGAAGATGTTAAAGGGATTAAGTTTGTTCAGAAAGGTTATTGGGTTAACTTGGTTTCCACTCATGATGTAGATGCATATCTGCATCAATCATTTGGTTCTCGTGTGAATCTGAAAATTAAGAAAGGCCCTCAGCAAATATGCATTGAATCTCCTGGAGTGCATGAACTTCACTTTGTAGATTCTTGTATACATTTTGGCAGCTCACCTGTGAAAATTGACACTGCCAACACATCGCCTATCTATCTGAAAGGAGAAAAGTATTTACTCCAAGGAGAAATTAAGGTTGAATTGACCTCACAAAGCGGTGTTAACCAATTACCTAAAAATCTAGTGGTTGACATTTTAAATGATGAAGGAAAAGTAATTGATGGAACTACTGCCAAATTTGTTGGAAACGAAAATGAACAATCACATACAGCTCTTTATGAGTATAAAGTATGGGCAAATCCTGGAGAAAAACTTACATTTGCACCTCGGGATATTCGCGACAACAATGAAAAAAAGATTTTATTTTATCCAAGAAAACATCAGGTCAAAGTGGCACAAGATGGATGTCAAGCTTCAATTCCTTCATTTTCTGCACGACTTGGGTTGTACATTCAAGGATCAGTTTCTCCCCCTCTTCCAGATGTTGTTATTAGAATCATAGCTTCTGGAGATAGTCAAAATGCTCAAATTAAGAAAAATGAATTGGCCTATGAAACGACTACAAGCACCGACGGCTTGTTTATTGGCGGACCCCTATATGATGACATCACTTACTATACCCAAGCTTCGAAGCCTGGTTATCATGTAAAGGAAATCAGACCGAATTCCTTTTCGTGTCAGAAGCTTGGTCAGATCTCAGTTCGTATACATTCCAAAGAAGATGCCAATGAATTATTTCCTTCGGTGTTGTTATCATTAAGCGGGGAAGATGGTTATAGAAACAACTCAATATCTGCTGCTGGTGGAACTTTTGTATTTGATAATTTATTTCCTGGAAGTTTTTATCTCCGTCCTCTGTTGAAGGAGTATGCTTTCTCACCATCAGCACAAGCAGTTGAACTCGGGTCCGGGGAGTCCACGGAAGTTTTTTTCCAAGCTACACGTGTTGCTTACAGTGCCATGGGCGTGGTTACTCTGTTATCTGGTCTACCAAAGGAAGGCGTTTCAGTTGAGGCCCGTTCTGACACAAAAGGTTATTATGTGGAAACCATCACAGATTCATTAGGAAATTATCGCCTAAGGGGACTTCATCCTGATACAACTTACACAATTAAAATAGCAAAAATAAATGGGCTTGGCACCTCTAACATCGAACGGGCTTCCCCAGAATCTGTTGAAGTGAAGGTTGGATATGAAGACATCAAGGGATTAGACTTTTTGGTTTTTGAGCAGCCACAAATAACTTTATTAACCGGCATTGTACGAGCAACCAGTATCAAAGAAGTGTTGCATGAACACCTACAGTTGGAAATTAGATCAGCTAGCGATCCATCAAATATCGAATCACTGTCACCATTGTCAATTTCAAACTTCTTCCAGATAAAGGGTTTGCCCAGGGGTAAACATCTTCTGCAACTTCGGTCTACTCTAACACCACGCACCCTCAGATTTGAATCTGAAGTGATTGAGGTTGATTTGGAGAAAGCTACCCAAGTTCATGTGGGTTTCTTGAAATACAAAATTGAGGATGATCACCATAAACAGCAGGAATTGACTCCGGCACCTGTGTATCCACTCATTATTGGAGTATCAGTGATTGCATTATTTATCAGCATGCCAAGATTAAGAGACATGTATCAAAGCAATGTAGGAGTACTGGTACCGGGACCCACTGCATCGACGAAGAAAGTTGTGAGAAAGAAGACTTACTAA 3858 40.77 MGRKKVEERGNVKATVYGLLKWAKPAQKAGTRKHRPQAHNLGGSVSLASRASASISARTQIDSSCSQHQILHKICRCALTMAHKYHNFLTCYFVFIAFTINTTVKLVSADAIQGCGGFIEASSSLIKSRKPTDAKLDYSHITVELRTLDGLVKDRTQCAPNGYYFIPVYDKGSFVIKIKGPEGWSWDPDQVPVLVDHTGCNANEDINFRFTGFGISGKVVGAIGGASCKSKDGGPSNVNVELLNSNGNVVSSVFTSAAGSYSFTNIIPGLYNLRASHDDLNIEVKGSAEVIELGFGNSQVDDVFFVTGYDIRGSVVAQGNPILGVHFYLYSDDVKEVHCPQGSGNPSGDRTALCHAISDVGGTFKFKSIPCGSVYELIPYYKGENTIFDVSPPSAIVIVQHGHATVSEKFQVTGFSVGGRVIDSVGKGVSGVKIVVDGIERSITDKEGYYKLDQVTSKQYLIEAKKEHYKFDKLINFMVLPNMASVADIKAVYYDVCGSVHTVDSGYGVKVALTHGPDNVMPQTKKIDDNGYFCFEVPPGDYRLSAIAATPEATPHLLFSPPHIDVNVNGPLLSLKFSQAQVNVGGSVTCKEKCDSSVSVDLVRLDAKSNEKRQTVGLTDQSSEFLFQNVIPGNYKLEVKHLSKEAKSEEDKWCWEQSSVPLNVGTEDVKGIKFVQKGYWVNLVSTHDVDAYLHQSFGSRVNLKIKKGPQQICIESPGVHELHFVDSCIHFGSSPVKIDTANTSPIYLKGEKYLLQGEIKVELTSQSGVNQLPKNLVVDILNDEGKVIDGTTAKFVGNENEQSHTALYEYKVWANPGEKLTFAPRDIRDNNEKKILFYPRKHQVKVAQDGCQASIPSFSARLGLYIQGSVSPPLPDVVIRIIASGDSQNAQIKKNELAYETTTSTDGLFIGGPLYDDITYYTQASKPGYHVKEIRPNSFSCQKLGQISVRIHSKEDANELFPSVLLSLSGEDGYRNNSISAAGGTFVFDNLFPGSFYLRPLLKEYAFSPSAQAVELGSGESTEVFFQATRVAYSAMGVVTLLSGLPKEGVSVEARSDTKGYYVETITDSLGNYRLRGLHPDTTYTIKIAKINGLGTSNIERASPESVEVKVGYEDIKGLDFLVFEQPQITLLTGIVRATSIKEVLHEHLQLEIRSASDPSNIESLSPLSISNFFQIKGLPRGKHLLQLRSTLTPRTLRFESEVIEVDLEKATQVHVGFLKYKIEDDHHKQQELTPAPVYPLIIGVSVIALFISMPRLRDMYQSNVGVLVPGPTASTKKVVRKKTY 1285
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02081 1285 Pfam BOS complex subunit NOMO1-like, beta sandwich domain 863 937 IPR055073 -
Mimi16g02081 1285 Gene3D Immunoglobulins 227 302 IPR013783 -
Mimi16g02081 1285 SUPERFAMILY Hypothetical protein PA1324 229 279 - -
Mimi16g02081 1285 SUPERFAMILY Carboxypeptidase regulatory domain-like 416 511 IPR008969 -
Mimi16g02081 1285 SUPERFAMILY Cna protein B-type domain 1037 1100 - -
Mimi16g02081 1285 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 105 1263 IPR051417 GO:0005789(PANTHER)
Mimi16g02081 1285 Pfam BOS complex subunit NOMO1-like, first beta sandwich domain 132 208 IPR055075 -
Mimi16g02081 1285 Gene3D - 417 494 - -
Mimi16g02081 1285 SUPERFAMILY Cna protein B-type domain 958 1017 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02081 K26500 BOS complex subunit NOMO