AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02083 ATGAAGTTTGATAATTACATTCTTGTTATAATTTCCATTCTTTTTTTATGTTTTGTTATCTTCACAAAAGGTACGGATTTCTCACAATCCTCATCAAACGAAGAAGAAATATATGATGATATTAAAAAGACATTTCGACCCGCTTTGGATGATGCCAATGAAAAGCTTGGTCCAGTTTCATCATTGGATATTGACCTAGATGAAGCTAAAGAGGCACTTGGGCCAATTCCGTCATTTGACGAAGCTAAAGAGGCGTTAGGGCCTGTTTCATCCTCCGTTTTAGACAAAGCAAAAGAGGCCCTAGGCCCAATTTCACCCGCAACTTTAGATGAAGCAAAAGAGGCCCTTGGCCCTGCAGCTTCTAAAGCAAAAGAGATTCTGGCTCCAATTTCACCGGCGGCTTTGGAAGAAGCAAAAGATGTCCTCGGTCCTGCTTCAGCGAAAGCAAAAGAGATTCTCGGCCCTGCTTCAGCTAAAGCAAAAGAGGTTCTCGGACCTGCTTCAGCTAAAGCGAAAGAGGTTCTCGGTCCTGCTTCAGCTAAAGCAAAAGAGGTCCTCGGCCCAGCTTCATCTAACATCATAGATAAAGCCCGAGACAAACTTGACTCGATCACATCTTGGATTACCCAAAACAAAGAAGAGGTAACTTCCGAAACTCATCAAGAATCCGACCCAAAAGAGGCACCGGGCCCTGCATCGGCTTTCGACCCATATGGAATCTTAGATGGCGCGAAACAAAAATTTGATTCCCTTTTGGATGCCATTACACATGAGAAAATACAAATATCCCAAAAGGAATCTGGCCCAATTTCTTCATCTGATGAAGACAGATCGAGTCCTAGCCCAACATCTGCCCCTGCCCCGATTTTGCCTTCAACTTTCGAGGAAGCAAAACACGCGATAGGTTCATATTCTTCTAAAGCTATAGATGCAGCTAAAGAAAAATTTAGCTCAATTTCATCATATATATCCGAAAATAAACTACAAATATCACCTGTATCAGACACTAAGCTCCATTCAACTCCTGTATACTTGGACCATGATGTTGCTTTGGCTGTTGAGTCAATGATCAAGCAAGCAGAATCAAATTCACAGTTAGCTATCGACGAGGCTAAAACGTTGTTTAGTGATCCGTTGGTTGATTCATCAGATACTGGAAAATGTGTGAAAGAATGTTTGGGTCATTATGAATCCTGCAATCTCAAACTAAACAAGGCCATGGAAGATCTTAAGGCCCGCAACGTCGAATTGCTCACAGATGATATTGGTGCAGCTGAAGGAGAAATATATGCATGCCAAAAGTGCTATAAAGATACACAGTCTCCGTTTAATGATTTGGAGGCGGCTACAATCAAGGCTACTCGCGAATGCTTAAATGTCCTAGATCATTCTGCTTGA 1398 42.06 MKFDNYILVIISILFLCFVIFTKGTDFSQSSSNEEEIYDDIKKTFRPALDDANEKLGPVSSLDIDLDEAKEALGPIPSFDEAKEALGPVSSSVLDKAKEALGPISPATLDEAKEALGPAASKAKEILAPISPAALEEAKDVLGPASAKAKEILGPASAKAKEVLGPASAKAKEVLGPASAKAKEVLGPASSNIIDKARDKLDSITSWITQNKEEVTSETHQESDPKEAPGPASAFDPYGILDGAKQKFDSLLDAITHEKIQISQKESGPISSSDEDRSSPSPTSAPAPILPSTFEEAKHAIGSYSSKAIDAAKEKFSSISSYISENKLQISPVSDTKLHSTPVYLDHDVALAVESMIKQAESNSQLAIDEAKTLFSDPLVDSSDTGKCVKECLGHYESCNLKLNKAMEDLKARNVELLTDDIGAAEGEIYACQKCYKDTQSPFNDLEAATIKATRECLNVLDHSA 465
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02083 465 MobiDBLite consensus disorder prediction 262 283 - -
Mimi16g02083 465 SUPERFAMILY Apolipoprotein A-I 56 204 - -
Mimi16g02083 465 Coils Coil 400 420 - -
Mimi16g02083 465 Gene3D Invertase-pectin methylesterase inhibitor family protein 334 463 IPR035513 -
Mimi16g02083 465 SUPERFAMILY Plant invertase-pectin methylesterase inhibitor 345 460 IPR035513 -
Mimi16g02083 465 MobiDBLite consensus disorder prediction 262 290 - -
Mimi16g02083 465 MobiDBLite consensus disorder prediction 211 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02083 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129591 Mimi16g02083 Mimi5g01622
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3981853 Mimi Mimi16g02083 Mimi-Chr16:82911975 Mimi5g01590 Mimi-Chr5:74040739
4032449 Mimi Mimi16g02083 Mimi-Chr16:82911975 Mimi5g01622 Mimi-Chr5:74500449
4032463 Mimi Mimi16g02083 Mimi-Chr16:82911975 Mimi5g01622 Mimi-Chr5:74500449