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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02084 ATGAACAGCAATCCGGCAGGAGCACCATCAAAAGCGAGAGTTGGTTCATCCCAGCCGTCAGAGACATCATTTAAACGCAAACGTGGTGTTTTTCAAAAAGATTTGCAGCATATGATGTATGGTTTTGGAGATGATCCTAATCCGTTGCCAGAGACTGTTGCTCTTGTGGAGGACATTGTTGTTGAGTATGTGACAGATATGGTGCATAAAGCCCAAGACATTGCATCAAAGAGAGGAAAGCTTTTGACTGAGGATTTCTTGTTCTTGATCCGAAAGGACTTGCCAAAGTTAAACCGTTGTACAGAATTGCTGTCAATGAATGAAGAACTGAAACAGGCCAGGAAAGCATTCGATGTTGATGAGGAGAAACTCGCATCAGGCGAGTGA 387 43.41 MNSNPAGAPSKARVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDMVHKAQDIASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLASGE 128
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02084 128 CDD TAF13 28 118 IPR003195 GO:0006366(InterPro)
Mimi16g02084 128 Gene3D Histone, subunit A 30 74 IPR009072 GO:0046982(InterPro)
Mimi16g02084 128 Pfam Transcription initiation factor IID, 18kD subunit 30 118 IPR003195 GO:0006366(InterPro)
Mimi16g02084 128 Coils Coil 103 123 - -
Mimi16g02084 128 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID-SUPT3-RELATED 8 126 IPR003195 GO:0006366(PANTHER)|GO:0006366(InterPro)
Mimi16g02084 128 MobiDBLite consensus disorder prediction 1 28 - -
Mimi16g02084 128 MobiDBLite consensus disorder prediction 1 25 - -
Mimi16g02084 128 FunFam Transcription initiation factor TFIID subunit 13 30 74 - -
Mimi16g02084 128 SUPERFAMILY Histone-fold 31 73 IPR009072 GO:0046982(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02084 K03127 transcription initiation factor TFIID subunit 13