Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g02118 | ATGGATTCCACCACTCAAGAACTTAAACACCGAGCCAAAGACCAAACTCCGACAGTTATTGATCAAGATGATGACACCAGTGTTGGGATAATCTTGATGTGTCAATGGGACTCGACTTTCAGATCGAGAAAAGAACGTAGTAGCAAGAAAGAAGACCGTCACATCGCCGGAAGGAAGAAAGCACCGGTGATTGCAAGACCATTCCCGGGAAAGAAGAACAGAAGCCTAGCTGTTGCCGGAAGGAAAATTGGAGAGAAGACCGTGGCCGGAAATTATTCTGGTGTAGAGACCGACGAGCTGAAGGTTCAACGACAGAGAAAGAGACCAATGGCTGAAAAATCTAGACAGAGACCGACCTGTTTTTGGCCGGAAAAAAACCCGAACAAGATCAGTTCGTTTGGAAGAAAAAGAAGATCCAACATGACTCAGAAGTCACGTCGTCCCGCAATCCCGAGACGTGGTATCCGATCACTCGCGGTTGGGATCGCGATCCCGTTGGCTCTCACCTTGGCCAATATAACGATGTGTGGCTGGAACCGTAGCTACCGAACCATTCAGAAGCCCTTCTGGATCCCGCCGTTATGGGCTTTGCATTTAACATGTTTGTCTTCGGCTTTCGTCATGGGTCTGTCCGCTTGGCTGGTCTGGGCCGAAGGCGGGTTCCATGAAAACCCGGCTTCGGTCGGGTTTTATTTGGGTCAGCTGGTTCTGAGCCTGACTTGGGACACGGTATTCTTTAAGATGGGTGCGACAAGGCTGGGGTTATTAGTGTGTTTGGGCCAGATGGCGGCTATGTTGTCTTGCTATCGGATGTTCGGGCGGGTTAACCGGACTGCGGGTGACTTGGTGAAGCTTTGTTTGATCTGGGAGTGGCTGGAGGGAGCTTGCTCGATTTCGCTCGGGAGAGTAAAGGTGAACGAATGGGCCGAAAATGGGAGTGGAGGAAAAGTGCGCATTTTATCTACCATTAGCGGCGATAAATCGCCACCAAAGGTGTCGCTGCTATTGGTTAACGAAAAGAAAAGATCTCAGCCTTTGATTTCAACGGTTGGATCGGATGTATGCAGATCCGCGCTTCTTGTCGCCGCAATTGCTCCTGTCGCCGCTAATGTCGTCGCCGCTAATGGGCTTTTTCTTGTAGTGGTACTCTTTTTCCCAATCCTGTCACTCACTTTGGTTTGA | 1182 | 50.0 | MDSTTQELKHRAKDQTPTVIDQDDDTSVGIILMCQWDSTFRSRKERSSKKEDRHIAGRKKAPVIARPFPGKKNRSLAVAGRKIGEKTVAGNYSGVETDELKVQRQRKRPMAEKSRQRPTCFWPEKNPNKISSFGRKRRSNMTQKSRRPAIPRRGIRSLAVGIAIPLALTLANITMCGWNRSYRTIQKPFWIPPLWALHLTCLSSAFVMGLSAWLVWAEGGFHENPASVGFYLGQLVLSLTWDTVFFKMGATRLGLLVCLGQMAAMLSCYRMFGRVNRTAGDLVKLCLIWEWLEGACSISLGRVKVNEWAENGSGGKVRILSTISGDKSPPKVSLLLVNEKKRSQPLISTVGSDVCRSALLVAAIAPVAANVVAANGLFLVVVLFFPILSLTLV | 393 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g02118 | 393 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Mimi16g02118 | 393 | MobiDBLite | consensus disorder prediction | 101 | 121 | - | - | |
| Mimi16g02118 | 393 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Mimi16g02118 | 393 | Pfam | TspO-MBR family | 165 | 289 | IPR004307 | GO:0016020(InterPro) | |
| Mimi16g02118 | 393 | PANTHER | PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR | 141 | 298 | IPR004307 | GO:0016020(InterPro) | |
| Mimi16g02118 | 393 | Gene3D | TspO-MBR protein | 154 | 302 | IPR038330 | - | |
| Mimi16g02118 | 393 | CDD | TSPO-MBR | 158 | 289 | IPR004307 | GO:0016020(InterPro) | |
| Mimi16g02118 | 393 | FunFam | translocator protein 2 | 154 | 306 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g02118 | K05770 | translocator protein |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 129604 | Mimi16g02118 | Mimi5g01569 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:83582296 | Mimi5g01569 | Mimi-Chr5:73728430 | dispersed | |
| Mimi | Mimi-Chr16:83582296 | Mimi6g01539 | Mimi-Chr6:60989672 | transposed |