AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02123 ATGGATAAAGATGATGAAGATCGTAATAAACGTGTGGAGTGGCTCCATTCTAAACAGTATTCAGCTGCTGGTAACATTTTTAAAGACCCACAAAAGACCACGCGGATTGGGGATGAATATCAGGCACAAATTCCATCTTTAATGACAGAAAATGATGATCAAAACATCTTTGAATTTGGCCTGTCAATTCCTGTCACCTGGGTTCACAATCAAGAAAAGAACATAGAAGAAACCATGAGGTGTAAAGCGAATGCAAAGGGTAAATCTGGCAATGTTGGTTGTGGAACAGACAATGATTTGGTCCCAGTTCCTTGTTCATCATGCGAAGAATCTTGGAGTGCAATTGAACATGATAGTTTTATTCTTGGTTTATATATATTTGGCAAGAATCTCCGTGTTGTAAACAAGTTCATGGGAAACAAAGGAATGCAGAATGTGATATCTTATTACTATGGGAAGTTTTATGGAAGCAGTGAACACCAAAAATGGTCAACATATCGGAAGAAAAGAATTAGCATTGGAAAAAAGATTTTCAATGGGTGGAGGCTGCATGAGCTTTTGTCTCGCTTACTTTCGAATGTGACAGACGAGTGTAAAGCTAGTTTGACACAGGTTATTAGAATGTTTGAGGCGGGTAAACTTTCGTTTGAGAAGTATGTATTCAGTTTAAGGGATACCATGGGGATTGATCTTCTTGTACAAGCAGTAGCCATTGGCAAAGGAAAACAGGATCTTACTATCAAGACCAGAACGCGATTAAGAAGCAAAAAGATCCAATCCACATGCTCCTCTCTTAAAACAGAAGAAATTGTTGATATTTTGAAGGACAGAATTGGATTAAGCAAAGCGCGATTAAATGAGTTCTTCTGGGCTGCTGTGTGGCCTCGTCTTTCAGCACGAGGATGGCACTCTGAACAGCTAAATAACTATGCATTCCAGAAGTCAAAGAATATAGTGTTTCTTGCACCTGGTGTAACAAAGTTTTCGAGGAGGAGCTTGATCAAAGGAATTCAGTATTTTGACTCGTTGACCGAAGTCTTGAATAAAGTTGCATCTGAACCGCACCTTGTTGATCACGAACCTGAAAAGGATCAGTTGGTGGTGCCATGTGTGACACATGGGTCGGATGACGAACATGATTTGATGAAATGCGCAGTTGTGAATACCAGTTTCGCTGGGCTTGTTGCAGACAGAGAGCTCACAGGCTTAAAAAGTGTTTTCGGAGAAACCAAACACAGCACAACAAAAGAATCTCAAAAAGAAGATGTGAATCATAACACAGTGGATGATTCACCAGCCTCTGAAGCTGTAAACAATGTTGATCCAGATGAGCAACCAGCCAAAAAAATGAAGTTGGTAGTCAAACAAAAAACAAAACATCAACAGGTTAAAAATACTAAAAATGAGAAGCAGCATACAAGGATCGTGATCGACTTGAACAACCCTCGAGTGGATTCCGGATTAAATGATGATAGCAACTCGTCGTCTGCTAAAAAAATGGTTTTATCTAAAACAACCACAAACCAGGATCCTGACATGTTAACTCGTCTTGCTAATGGTCAACGACAGAGCAGAAGAAACCGTGCATTGACCCCAAGAGCAATGGAAGCTCTTGCAAATGGATTTATGAACCCAAAAACGAAGAGAGAGCCCGAGGATAGGACCCTCAGGCGTGTTCGTGCTAAAACGGCTCCCATCTCGAGCTGTGGTCCGGTTTACTTGGTGGATTGA 1731 40.73 MDKDDEDRNKRVEWLHSKQYSAAGNIFKDPQKTTRIGDEYQAQIPSLMTENDDQNIFEFGLSIPVTWVHNQEKNIEETMRCKANAKGKSGNVGCGTDNDLVPVPCSSCEESWSAIEHDSFILGLYIFGKNLRVVNKFMGNKGMQNVISYYYGKFYGSSEHQKWSTYRKKRISIGKKIFNGWRLHELLSRLLSNVTDECKASLTQVIRMFEAGKLSFEKYVFSLRDTMGIDLLVQAVAIGKGKQDLTIKTRTRLRSKKIQSTCSSLKTEEIVDILKDRIGLSKARLNEFFWAAVWPRLSARGWHSEQLNNYAFQKSKNIVFLAPGVTKFSRRSLIKGIQYFDSLTEVLNKVASEPHLVDHEPEKDQLVVPCVTHGSDDEHDLMKCAVVNTSFAGLVADRELTGLKSVFGETKHSTTKESQKEDVNHNTVDDSPASEAVNNVDPDEQPAKKMKLVVKQKTKHQQVKNTKNEKQHTRIVIDLNNPRVDSGLNDDSNSSSAKKMVLSKTTTNQDPDMLTRLANGQRQSRRNRALTPRAMEALANGFMNPKTKREPEDRTLRRVRAKTAPISSCGPVYLVD 576
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02123 576 PANTHER ATROPHIN-RELATED 6 462 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
Mimi16g02123 576 MobiDBLite consensus disorder prediction 410 428 - -
Mimi16g02123 576 SUPERFAMILY Homeodomain-like 110 153 IPR009057 -
Mimi16g02123 576 Gene3D - 110 153 - -
Mimi16g02123 576 MobiDBLite consensus disorder prediction 410 446 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02123 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:83669754 Mimi4g01018 Mimi-Chr4:19191392 dispersed