Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g02148 | ATGACGAAAACCATCGTGAAATACGCCGTCGTCGATGCATTTACAGACACGCCGTTCAAAGGAAATCCGGCAGCCGTGTGTTGGTTAGAGGATATCGAGAAAGATGACAAGTGGATGCAATCAGTTGCCGCTGAATTCAATATTTCTGAGACTTGTTATTTGACTCCTATTGTTGAACACGGTCAAGAAAACCCTAGATTTCGTCTCAGGTGGTTCACTCCTGTAGCTGAGGTGGAACTTTGTGGTCATGCAACTTTAGCAGCTTCCCACTTCCTTTTTCAGTCTGGATTGGTGAATTCTAGCACAATTGAATTTTCAACCCTTTCTGGAATTTTGACTGCCAAAAAAATCCCAGATCACGAGGTCAACGGCTCATCAAATGGTGAATCAAATGCCAGCTTCTACATCGAGTTAGATTTCCCTGTTGTGCCTGTTTCAGATTACAATGATCTTGAGGTTTCTGCAATTTCAGAAATATTGAATGGTGTTTCTATTGTTGATGTAAAGAAGAACACACTTGATGATATCTATGTGGTGCTTCCATCTGCAAAAGATGTTGCAGAATTTAAGCCGCAGTTTAGTAAAATCAAAGAATCCCCTGGCAGAGGGATTGTGATTACAGCAGCTGCTCCTACTGGCTCAGGGTTTGATTTTTACAGTCGCTTCTTCTGCCCAAAACTGGGAATAGATGAGGATCCTGTTTGTGGGAGTGCACATTGCGCCTTAGCAGCCTATTGGCATGAGAAATTGGGGAAATGTGATTTTGTTGCATATCAGGCGTCACCTAGAAGTGGGGTATTACATGTTCATCTCGATAAGGTGAATAAAAGAGTACTTCTTCGAGAGGCAACGGATGGCATGGTGACAACAAGAGCGATGGAGGCAACAATTAGTAGAGTGGTGACACAATGGTGCGAGTCTGTGGGATGGGTCCATCCATTATGGGTATGGTTAGGATTTGGGATACTCTTCATTGATCCAACTTCCAAATTGATGCTTGTGTTGGAAGATAGAAGTGGTTGTTTTGGTAGGTTCATCATTTTGTTTGCATCTGCATATTACATTTACACCCACATGGGTTGCTTTGTGACTTGTACCGTACAAGTTGGTTTCACACCATGGAAGCTTGATTTGTAA | 1137 | 42.57 | MTKTIVKYAVVDAFTDTPFKGNPAAVCWLEDIEKDDKWMQSVAAEFNISETCYLTPIVEHGQENPRFRLRWFTPVAEVELCGHATLAASHFLFQSGLVNSSTIEFSTLSGILTAKKIPDHEVNGSSNGESNASFYIELDFPVVPVSDYNDLEVSAISEILNGVSIVDVKKNTLDDIYVVLPSAKDVAEFKPQFSKIKESPGRGIVITAAAPTGSGFDFYSRFFCPKLGIDEDPVCGSAHCALAAYWHEKLGKCDFVAYQASPRSGVLHVHLDKVNKRVLLREATDGMVTTRAMEATISRVVTQWCESVGWVHPLWVWLGFGILFIDPTSKLMLVLEDRSGCFGRFIILFASAYYIYTHMGCFVTCTVQVGFTPWKLDL | 378 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g02148 | 378 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 8 | 141 | - | - | |
| Mimi16g02148 | 378 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 142 | 281 | - | - | |
| Mimi16g02148 | 378 | SUPERFAMILY | Diaminopimelate epimerase-like | 7 | 280 | - | - | |
| Mimi16g02148 | 378 | PANTHER | PHENAZINE BIOSYNTHESIS PROTEIN | 6 | 281 | IPR003719 | GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER) | |
| Mimi16g02148 | 378 | Pfam | Phenazine biosynthesis-like protein | 11 | 279 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Mimi16g02148 | 378 | NCBIfam | PhzF family phenazine biosynthesis isomerase | 8 | 250 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g02148 | K06998 | trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:84177090 | Mimi18g00449 | Mimi-Chr18:9051502 | dispersed |