AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02153 ATGGGATTCAATTCAGTCTACAAGGTATTACAGGAGGTTTTTCCACAGGTTGATGCTCGTGCTCTAAAAGCTGTGGCTATAGAACACTCTAAGGATGCAGATGTGGCTGTGGAAGTTGTTCTTGTTGAGATCATCCCTCATCTTCCTGAAAAACCACCTACAATTGTTTCATCAAGTACTAGCAAGAGTCCAGTCAGTTACTTTGAAGATTTGATGGATGCAGGTGGTGATGAAATTAGCCAACCAAAGTCAACTATGAATCAATTAGTTATTAATCCATATCAGCATGAACAGTCAACTGAATCTTGTGTTGTTTCAAGCGTTATTGATGGAACTTTGCCTGGTGCAACGAAAGCTTTAGATACTAGTTCATCGGCTCAAGTTAACAGTGATACAATTATTAAGCCAGTAAATTTGGAATCACTTGCTACATCATCTTATCATGGTGCAAATGGTGAAATTATGACTGAATGTTCATCAAGATTTTTGGAGACAAATGGAGACAACATTACAACCAAAAGTTGTGAAACAAATTTAGATGCAGCTCAAGAGCCAAATCCCAGTTCATCAAAATTTGTTTCGGAAAAAGATGCTTTTGCCGCTGAGTTTGTTGATTCTGATGATGAGTCATATATGAAACCTGTGCTTACTAAATCAGATGAAAAATGTTGCACTGAATTTCTTCAGGAGATTATTGAAGAAGCTAATAATAACAAGAAAACCCTAGTGGAGGCAATGAGTTCAGTTGTTGATCTTATGCGAGAGGTAGAATCTAAAGAAAAAGCTGCTGACCAAGCAAAAGCAGAAGCTACCCATGATTGCTTAGATATTCTTGGCAAGGTGAACGAGGTTAAACAGGCACTTTCAAGGGCAAAAGAAGCCAATGATATGCATGCTGGCGAAGTTAATGCAGAGAAGGCCATTTTAGCTGCTGAATTGAAAGAGCTGCAGCTTCGTTTATTTAATCTCTCGGATGAGAGAACAAGATCACTTGGAATTCTTGATGAGATGCGTGAAGCTTTAGAAATTAGATTAGCTGCTGCTTTAGATGAAATTGCTGCAGCAAAAAAACAGAAGATTGAAAATGAACGGGCTGCGAGAGGAGCTCTTTCCCACCAAGAAAGCTTAATGGAAAAAGTTGTTGAAGAGTCTAAGAAACTGAAGCTAGAAGCAGAGGAGAATTCTAAGTTGCGAGAATTCCTCATGGACCGTGGTCATGCAATTGATATCCTACAGGGAGAGATATCTGTCAAGTGCCAGGACGTGTTACTTCTAAAAGAAAAGTTTGACAAGGGAATCCCGCTATCCCGATCATTTTCTTCTAGCCGTACATCATCAATCTTAGCCTCTTCGGGCTCATCTTTTAAAAGTGTTGTGACACCCATTGCGTTTGAGCCCGAGACATATGAAAGCCTAATGAAGAGTGCAGACATGGGTGATTCGTTTGGATTTCTTGACAGGAGTTCAATGTCAGATGTAGCTCCTCAATCACTCAAGTTTCTAGAAGAAACTGTAAACTCTATTGATGATCATAAGGTGCTTCTAGAAGATGGTTGGGAAATTTTTGACAAGTAA 1575 39.3 MGFNSVYKVLQEVFPQVDARALKAVAIEHSKDADVAVEVVLVEIIPHLPEKPPTIVSSSTSKSPVSYFEDLMDAGGDEISQPKSTMNQLVINPYQHEQSTESCVVSSVIDGTLPGATKALDTSSSAQVNSDTIIKPVNLESLATSSYHGANGEIMTECSSRFLETNGDNITTKSCETNLDAAQEPNPSSSKFVSEKDAFAAEFVDSDDESYMKPVLTKSDEKCCTEFLQEIIEEANNNKKTLVEAMSSVVDLMREVESKEKAADQAKAEATHDCLDILGKVNEVKQALSRAKEANDMHAGEVNAEKAILAAELKELQLRLFNLSDERTRSLGILDEMREALEIRLAAALDEIAAAKKQKIENERAARGALSHQESLMEKVVEESKKLKLEAEENSKLREFLMDRGHAIDILQGEISVKCQDVLLLKEKFDKGIPLSRSFSSSRTSSILASSGSSFKSVVTPIAFEPETYESLMKSADMGDSFGFLDRSSMSDVAPQSLKFLEETVNSIDDHKVLLEDGWEIFDK 524
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02153 524 ProSiteProfiles CUE domain profile. 2 45 IPR003892 GO:0043130(InterPro)
Mimi16g02153 524 Coils Coil 225 245 - -
Mimi16g02153 524 Coils Coil 249 269 - -
Mimi16g02153 524 Coils Coil 299 326 - -
Mimi16g02153 524 PANTHER OS10G0315400 PROTEIN 1 524 - -
Mimi16g02153 524 Coils Coil 338 365 - -
Mimi16g02153 524 CDD CUE 10 41 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02153 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129619 Mimi16g02153 Mimi17g02310
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:84254249 Mimi17g02310 Mimi-Chr17:81505529 wgd