AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02163 ATGGATTTCTTCAGATCCATATTAGCAGATGATCCGGATACCCTAGGTAATCACCGAGTATCCAATACAGATCTACGTCAAAATGAATCGCCAAAACATCAAGAAACCGAAGGCGATGAAGATGATGATGATTCCACTTCGAATGTCAATTCGTCAGACGACGGAACCGGCGGTGGTGGTTTATGGAGCTTTGGAGATCTAGTGAAAACTTTGACCACCAAATCCGAATCAGTGTTTGAAACGTACCGTCGCGATCTGAAGGAATTCGGGACCGGTTTGAGGAAAGAATCTGATTTGTTTCGTGAAGTTGCGAGTCGTGCTGTGAAGGAGTTACCGACGTCGATTGAGGTCGGTACGTCGGCGATTGACGGAGTGTTGAAATCGACTGCGGATATTATCGCACAAGGTAAGGAGGTTCTTCTTGCTCCTTCCGATGTTGATGATTCTGATGCTTCTGATAGACGTATTTCTAGTGATCGGAGTGGTTTGGATTCAATGCGTTTTAGTCGTTTTGATGCTCAGTTGAATGTGATCAGGAGTGATTCGCGAGCTTTCTGTGAAGATCCTGAGGATTTGGATGATTACAATAGCTGGAAATTAGGGTTTGTGATTGGTGATAAGAAGGATGAAATTGAGAATTTGGTTGGTGATAATGGACCTTTAGAGGCAATTTATTCCAAAATTGTTCCAGGTGAGGTTGATGATGCAACATTTTGGTTTAGGTACTTCTATAAGGTGCACAAGCTTAAACAACAAGAAGAAGTGAGAGCTAAGCTTGTGAAGAGATCATTATCGGTTGATGATGATGAAGAATTGAGTTGGGATGTTGATGATGAAGACCAAGCAGATGAAGATCAAAAGCAAGCACCACAACAACAACAACAAGCTGATCCGTTAAGATCAAACACCTCAAAAAACCAAGATTCAGACGATTTTAGAAAGAATGAAAGCACAAATGATGAAGTTAAAACTCAAAGTTCTGAGATTGTTTGTGAAGATAAAGAGATGATGACCAATGTGGTTAGTATTGATAAGAGCAATGTAGAAGAACTCAAATTCGGTGAGGGGAATGTGTCTACTATTGAGAAAGCTGAATCAGTCCCCAAATCTGATGAAAAGGTTGATCTGAAAGCGGATTCAGGTGAAATAAAAGATAGTAGTGTCACATTTCAAAGCCAATCTTCATTTCAGGAGGATGAAGATCTTGAGTGGGATGAGATTGAAGATCTTGGGAAAGCTGATGACCAAATCGTCTCTCATGGTGAATCAACAAACAAAGCCGACTTGCGCAAGCGATTGAGTACTACTGTAGATGAGGATGAGGATTTGAGTTGGGATATTGAAGATGACGATGAGCCGTTAAAACCAGGTAATAATTGA 1380 40.94 MDFFRSILADDPDTLGNHRVSNTDLRQNESPKHQETEGDEDDDDSTSNVNSSDDGTGGGGLWSFGDLVKTLTTKSESVFETYRRDLKEFGTGLRKESDLFREVASRAVKELPTSIEVGTSAIDGVLKSTADIIAQGKEVLLAPSDVDDSDASDRRISSDRSGLDSMRFSRFDAQLNVIRSDSRAFCEDPEDLDDYNSWKLGFVIGDKKDEIENLVGDNGPLEAIYSKIVPGEVDDATFWFRYFYKVHKLKQQEEVRAKLVKRSLSVDDDEELSWDVDDEDQADEDQKQAPQQQQQADPLRSNTSKNQDSDDFRKNESTNDEVKTQSSEIVCEDKEMMTNVVSIDKSNVEELKFGEGNVSTIEKAESVPKSDEKVDLKADSGEIKDSSVTFQSQSSFQEDEDLEWDEIEDLGKADDQIVSHGESTNKADLRKRLSTTVDEDEDLSWDIEDDDEPLKPGNN 459
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02163 459 MobiDBLite consensus disorder prediction 1 58 - -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 352 459 - -
Mimi16g02163 459 PANTHER SYNAPSE-ASSOCIATED PROTEIN 28 446 IPR051494 GO:0005737(PANTHER)
Mimi16g02163 459 ProSiteProfiles BSD domain profile. 198 250 IPR005607 -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 365 382 - -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 279 331 - -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 304 330 - -
Mimi16g02163 459 SUPERFAMILY BSD domain-like 168 256 IPR035925 -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 411 439 - -
Mimi16g02163 459 Pfam BSD domain 198 254 IPR005607 -
Mimi16g02163 459 MobiDBLite consensus disorder prediction 287 303 - -
Mimi16g02163 459 SMART wurzfinal6 198 250 IPR005607 -
Mimi16g02163 459 Gene3D BSD domain 158 260 IPR035925 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02163 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:84531602 Mimi9g00532 Mimi-Chr9:9098613 dispersed