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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02170 ATGGCGTCTATCGGGCTGAGTTTTCTGCAAGTTCTTGAGAACCCATCAATGGCTTCCAAGAATCTTGAAGAAAACGCCGAGGTTTATGTTCATCCAATGGTGAAACGATCTGCATCAACATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTCTAGGAAGTGAAACCGGGAGTGATGGTAGTGAAAGTGGTGACGAATTCTGTGTGATTTCAATGGCGGAAAGAGAGAGATTGAGAGCAATTCAACGGTCAAAGTGCCGGAGTTTTGGCCGGAAAGTTTGCCGGAATGACTTTCCACCTCCGTTGACCTCCATCGCCGGCTTCCATGGTGCGGTGAATGTGAAGCAGCACAGGGAAGGTGGACGGTTAATTATTAAAGCAGTGAGCTTTTCTAACTGTGGTACAAGTTTTCAAGCGGAACGTACAAACGGGAGACTGAAGCTTTCCATGTTGAGGGACTGTCCGGTAAATTATGAGAGTGAAAGGGGTGAACTTGAAAATTATGAAGCAGGTGGTGAAGACCATGAAGTGGAATCAGATAAGGAGGAAGAGGAGGAGGAGGAGATGGTGGAAGCGGTGGCGGTGGCGGAGGAGGAGGAGGATGGTGGTACTGGTGGCGGTTGGGGGTGGGATATGGTTGAAAACCGGTGGAAGATTGCCGGAAAAAGTGAGGTGAATTTGGTAACAACGTGCAAGGAGGGTGAAAATCGGAACGAAGGGTTTCCGAACTGGCGTTCTACTTGGGTGGGCCGGGTGGCAATATCTTGA 771 48.9 MASIGLSFLQVLENPSMASKNLEENAEVYVHPMVKRSASTLSTKSLEMCTESLGSETGSDGSESGDEFCVISMAERERLRAIQRSKCRSFGRKVCRNDFPPPLTSIAGFHGAVNVKQHREGGRLIIKAVSFSNCGTSFQAERTNGRLKLSMLRDCPVNYESERGELENYEAGGEDHEVESDKEEEEEEEMVEAVAVAEEEEDGGTGGGWGWDMVENRWKIAGKSEVNLVTTCKEGENRNEGFPNWRSTWVGRVAIS 256
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02170 256 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 5 246 IPR021410 -
Mimi16g02170 256 Pfam Fantastic Four meristem regulator 98 151 IPR046431 -
Mimi16g02170 256 Coils Coil 166 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02170 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129621 Mimi16g02170 Mimi17g02305
421295 Mimi16g00524 Mimi16g02170
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr1:60941574 Mimi16g02170 Mimi-Chr16:84662976 transposed
Mimi Mimi-Chr1:61472353 Mimi16g02170 Mimi-Chr16:84662976 transposed
Mimi Mimi-Chr16:16558737 Mimi16g02170 Mimi-Chr16:84662976 wgd
Mimi Mimi-Chr16:84662976 Mimi17g02305 Mimi-Chr17:81379632 wgd