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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02172 ATGGATGCTTCAAGAACCTCATCTATTTGCTTTGGTATGGAATCTATGGTGCTTGAAAACGACATCCTGGGCTCAAAAACATATTGCAATCTAGGACTCAAACAAACTTCTAAGCAAAATCATGGAAACCCGAAAGTTTTATCACTTCTTTCATCAGTTCTCGAGAGGTCTGTTCAGATGAACGAGACATTACTTGAGAAAACACAAACTAAAGATGTTATTACAGTTTTTCATGGTTCGAGAGCACCGACTCTTAGCATTAAGGAGTATGTTGATAGAATATTCAAGTATTCGCGTTGCAGCCCTTCGTGTTTTGTTGTTGCACAGGTTTACATGGATCGGTTCATTCAGTGTGGAAATGTTAATTTGACTTCTCTTAGTGTTCATCGACTTCTCATCACAAGTATAATGCTTGCTGCTAAGTTTATTGATGACGCATTCTACAACAACGCGTACTATGCAAAAGTTGGAGGAGTAACAACAGCTGAGTTAAACAGATTGGAGATGAAATTCCTGTTTGGCCTGGACTTTCGACTCCATGTCAGCCTTCAAACGTTTGGCAGATACTGTGGTCAGTTAGAGAAACAAGTTTCAGGTGATATCCAAATAGAAAGACCACCATGGGCTATTCGCGCCCCATGTGGACTCAAAGAAACCTGGTCCAGCGGTGATGACTCGAGTCCTTATGCAACAACAGAGATACATATCGCGTAG 714 40.9 MDASRTSSICFGMESMVLENDILGSKTYCNLGLKQTSKQNHGNPKVLSLLSSVLERSVQMNETLLEKTQTKDVITVFHGSRAPTLSIKEYVDRIFKYSRCSPSCFVVAQVYMDRFIQCGNVNLTSLSVHRLLITSIMLAAKFIDDAFYNNAYYAKVGGVTTAELNRLEMKFLFGLDFRLHVSLQTFGRYCGQLEKQVSGDIQIERPPWAIRAPCGLKETWSSGDDSSPYATTEIHIA 237
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02172 237 Pfam Cyclin 61 179 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
Mimi16g02172 237 SUPERFAMILY Cyclin-like 93 180 IPR036915 -
Mimi16g02172 237 Gene3D - 34 206 - -
Mimi16g02172 237 PANTHER UNCHARACTERIZED 36 213 IPR013922 GO:0000079(InterPro)|GO:0019901(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02172 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129623 Mimi16g02172 Mimi5g01513
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:84768290 Mimi1g03482 Mimi-Chr1:118047931 dispersed
Mimi Mimi-Chr1:94377254 Mimi16g02172 Mimi-Chr16:84768290 transposed
Mimi Mimi-Chr16:84768290 Mimi5g01513 Mimi-Chr5:72779669 wgd