AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02193 ATGGCTTCTTTGTCAAAGGCGGATTCGAGGCGAATGTATTCGTGGTGGTGGAACAGCCACATCAGCCCTAAGAATTCAAAATGGCTTCAAGAAAATCTTACAGATGTGGATATCAAAGTGAAAGCAATGATAAAGCTCATAGAAGAAGATGCTGATTCATTTGCTAGAAGGGCAGAAATGTATTACAAAAAGCGACCCGAGCTTATGAAACTGGTTGAAGAGTTATACAGAGCATACCGGGCCTTAGCCGAAAGATATGATCATGCAACTGTGACCCTCCGCCAGGCCCACAAAACAATGACTGAAGCCTTCCCAAATCAAGTCCCCTCAGGGTGTGATGACTCAGCACCTAATTCTCCCTATGATACTGATCCTCAAACCCCAGATTCAAAGACCGCCAGAATTCCATGTTTTGACTCTGATGACTTGCAGAAAGATGGATCAACAGGAACCGCTAGAAAAGCCCTCAACTTCAGTGATTCAGAAGATGTCAACTCTAAAAACGGGACCCAGAATCGAAACTTATCTCGATTCGCGAGTGTAGACGTGAATGATGAAGAGATCTTATTATTAAAAGAAGCTCTGGCTAAGTTAGAAGATGAAAAGGAAGCTGGGTTAAAGCAGTACCTCGAGAGTTTGGATAAATTATCCAAACTCGAGTCTGAAATCTTAAAGTCACAAGAAGAATCTAAAGAACTGGCTGATCGTGCGAGTAAAGCTGAGGCCGAATCCCAAGAATTGAAAGACATGCTGCAAAAGTTGGAAGCTGAAAAAGTGGAAAGTCTTGATCTTTTCCATCAGGCACAAAAGAAAATCGAAGAAATTAATGAGCAAAATTTGAATGAAGAAATCAGTAGATTAAAAGATGAAAGAGATGCTGCTTATGATCAGCACAAACAGTCTTTGAATCTGATATCAGATTTGGAGAATAAGTTACTAGAAGCAGAGAAGGAAATCGAAATATTGAAGCTAGCAATCGCTAAATTAACTGAAGAAAAAGAAGAATGTGTTATTTTATACCAGAAATGCATGGAGACTATCGCAAGTCTTGAACTTAGACTTGTGTGTGCACAAGAAGAAACCGAAAGATTGAAAACTGAAATCGACAATGGAGTTTTACTTTTAAAGGGTGCTGAAGAACAGCGATCACTGCTAGAAAAGTCAAACAAGAGTCTTCACATGGAATTGGCGTCAATGGAAGTCAAAATAGGGAGTCAAAATCAAGAAATAACTGAAAAACAGAAGGAATTAGGGAGGTTGTGGACTTGTATCCAAGAAGAGCGGATACGGTTTGTGGAGGCTGAAACCGCTTTCCAAACTCTGCAACAATTGCATGCTCAATCTCAAGAAGAATTAAGGTCAATGGCTGGAGAGTTGCAGAACAGGGCCCAGATCTTACGAGAAATTGAAGCTCGCAATGAAGTTTTAGAAGGAGAGATACAAAAGCAAATTGAGGAGAACAAGAATCTTAGTGTGCTCAACTTATCTTCTTCCATTTCGTTGAAAGAAATGCAGGCAGATATCAGTAGCCTAAAGGAAGTCAACGGAAAGCTCAAAGAAGATGTTGAACTTCGAGTTGACCAAAGAAATGCTCTTCAGCAAGAAATCTACTGTTTAAAAGAGGAACTAAACGAATTGAACAAGAAGCATGGGTCAATTTTGGAGCAAGTTGCATATATCGGGTTGAAACCAGAAAGCCTGGGGTCATCTATAAAAGAGTTGCAAGATGAAAACTTTAATTTGAAGAAAGAATGGCAAACAGAAAAGGCTGCAAAAGAAGCTTTACTGGAGAAATTAGAAATTATGGGTCAACTTCTTGAGAGAAATGTTGTTTTGGAAAATTCATTATCAGATTTGGGTGCTGAATTAGAAGGAGTAAGGGGTAAATTAAAGTCACTTGAAGAATCTTATCAATCTCTTTCAGAAGATAAATCTAATATTGTTGTTGAAAAGGCAAATTTATTAGGTCAGTTACAAGTAACAACTGATAATTTGAGTCAAGTTTCAGAGAAAAACACTGTTCTTGAGAATTCCCTTTTTGATGCTCATGTCAAACTTGAAATCTTGAAGCAAAAGTCAAAGAGTTTTGAAGATTCATGTCAAGTGCTTGCTGATGAAAAATCTGCACTAATTAGTGAAAAGGGTACTCTAATCTCACAGATGGAAATTACTGAAAAGACCTTACAGGCTCTGGAGATGAAATACACTGATTTAGAAGAGAAATATTCATTAATGGAGAAAGAAAGAGAATCTACACTTCAAAAAGTAGAAGAGCTGAATGTATCGTTGGCTTTACAAGATCAGGAACATTTTATTTTTGTCCAAAAGAATGGCAAGCAATTGCATGCAATGAGAAGTCAAATTCAACTCCTTCAGGAAGAAAGTAAAAATAAAAACAAAGAATTTGGAGAAGAACAAGATAGAGCTTTTGATTCTGAAATCAAAATGTTCATCTTGTTGAAATGTGTACAAGATCTTGAAGAAAATAACCTCTCTCTGTTCAATGACGGTCATAAACTCCAAGAAGCATTAAAATTGTCTGAAAGTCTGATTCATGTTTTAGAGCAAGAGAAAACTGAAAACCAGATGAAAATCAAATCTTTATCTGATCAAAACAATAGATTGAAAAATGGGATGCATCAGTTGTTGAAATTTGCCGGTCTTTCTTTACATCGGGGATCCGAAAACGGGCAGGAACAGACTTATTTTGATAGCATACAGAAAACATTTGAAGGTACAAACTGTGCCCTGATTGAAAATGAAGAAAAAAACATGAAGTTGGTAGTTGAAATATCAGTTCTGGTCACACTTTTGAGGCAATTTAAAACAGAAATGGCAAATCTTGAGGCGGAAAAGTATGTTATTCATCAGGAGCTGGGTGTTCGGGATGAAAGGATTCTTGGATTGCAAAACGAGGCTCAAAAAATTTTAGAAGTGAATGAAACTTTGAGATGTAAAGTGATCGAACAAGATACTAATGAATCAGGGCTACGAACTCAGCTAGAGAATATACATTATGAGTTGTCGGTTGCTCAAGAAGCTTTCAGAACATTGCAGATGGAGAATTCAGTTGTTCTTGAAGAAAAGAAATCTTTGATGAACGTTAACTTTCATATCAAGAACAAAATTCTCGCTTCAGAAGAGGAAAACGAGGTCCTTATGACAGAGGTCCTAAGTCAAAGCATTCTCTCTCAAACTTTAAAGGATTACATTGATGAGAAACATGAAGAAATGTCTATGGTTGAGAAGAAATTGGAAGAGGTGGGAAAAGAAAATGTTGAACTTAAAAAGACTTTGGAAAAATCCGAACATGAATTGAAAACAGTTATATCTGTTCGTGATCACTTGAACTCGGATTTAGTGAACACAAGTAATTTGCTACAGTTGAAAGAAAAGGAACATAAGGAAGCAGCCCAACAAATAATGATGTTAGAGAATGACAAAATGGTGCTGTCTGAGACTGTAGCTGATCTGCAGAGAGATTACAGCGCTGTTAAAATGACAAAAGATCAACAAGGGCAACAAATTCTCAACCTTATACAAGAAAATGATCATTTGTGTAAAGAAAACCAGATTTTGGATGTTAAAATGCAACAATTGACAGACAATCTGGAAAAAACAGAGGAGAAGGCTCAATTCTTGGAAACAGAAGGATCATTACTTTATGGTGATTTGCAGACATCTGCGATTTATGAAGCTTTATTAGAAGAGAAGATCCATGAAAGTACTGAAATTTGTTCAAGTCTTCAAGTAGAAATTAACTCCAAAGATGTGACTAATGAAATCCTTAAAGAAAAAACCTACATTTTGGAACGTGAGAATGGAGATCTTAAAGCATGCGTGACTGCTTATGGTCTGGCCCTTGAATCTTTGAAGGATAGCATCATATCCTTGGAAGATCAAACATGTACCAGAACCAAAGTTCCAGAGTCTGATAACGAGAACACAAAGGGTGATGAATCTGTTACCATGGAGCGAGATGCATTTGTGGAGTTGCAGGATCTTCAAAGTAAGGTGAAAGTTATTGAAAAGGCAGTAGTCGAAATGCAAACGCGCTCAACGCAACAAAAGCTAGATTCAGATGCAAAGCTGGAAGCTGCTATGAAGCAGATCGAAGAATTGAGCTCTCAAAAGAATCCTCGCAGATCAAACAGTAAACCAAAATCAAGATCAGAGATCTCATTAGCAGACCCGAAAGACATTATGCTAGACGAAGCCTCTGAATGTTCTTCATATGGAATAAGCAAACGAGGAACAATCGATGGTGAGATTTGGGAAACCGCAGATGATTCCAGAACTATGTTCAAACACAATCCAACCCCTTCAGACGTGTCTCTCGATAACATCGTTGTGGATAAACTAGAAGTTTCTAAAAGATTAAAGGAGTCTCGCAATGACGAAAACAAGAGGAAGGTTCTTGAACGTTTAAATTCTGATGTTCTGAAGCTAACGAATCTTCAAATCACAATCGAGGATTTGAAACGGAAAGTTGAGATCACACTTAGGAGCAGACGAGGAAAAGCAATGATTGAATGTGAGACACTGAAAGGCCAACTCATGGAAGCTGAATCTGCTATCCAGAAACTATACGAGCTGAACGGGAAATTTGTAAAACAATTAGAAGGCAATGATGCCGAGACATCGCGTTCAACGTATGATGAATCTGAAGAGAGCGAAAGTATGAGACGAAAAAAGGTGGCGGAACAAGCGAGACGAGTGTCTGAAAAGATCGGTCGGTTGCAGTTAGAGATACAAAGGATACAGTTTGTGTTGGTGAAACTTGACGAAAACGAACACGAAGCCGCGGGTAAGACGAGGTTTCTAGACAGCAATAAACGGGTTCTGTTGAAAGATTATCTTTACGGGGGTGGAAGAACTAAGGCGACAGTTAGCAGCAGGCGGAAGAAAAGCCATTTCTGTGCATGTGTGGAGCCTTCGACTAAAGGCGATTAA 4953 38.16 MASLSKADSRRMYSWWWNSHISPKNSKWLQENLTDVDIKVKAMIKLIEEDADSFARRAEMYYKKRPELMKLVEELYRAYRALAERYDHATVTLRQAHKTMTEAFPNQVPSGCDDSAPNSPYDTDPQTPDSKTARIPCFDSDDLQKDGSTGTARKALNFSDSEDVNSKNGTQNRNLSRFASVDVNDEEILLLKEALAKLEDEKEAGLKQYLESLDKLSKLESEILKSQEESKELADRASKAEAESQELKDMLQKLEAEKVESLDLFHQAQKKIEEINEQNLNEEISRLKDERDAAYDQHKQSLNLISDLENKLLEAEKEIEILKLAIAKLTEEKEECVILYQKCMETIASLELRLVCAQEETERLKTEIDNGVLLLKGAEEQRSLLEKSNKSLHMELASMEVKIGSQNQEITEKQKELGRLWTCIQEERIRFVEAETAFQTLQQLHAQSQEELRSMAGELQNRAQILREIEARNEVLEGEIQKQIEENKNLSVLNLSSSISLKEMQADISSLKEVNGKLKEDVELRVDQRNALQQEIYCLKEELNELNKKHGSILEQVAYIGLKPESLGSSIKELQDENFNLKKEWQTEKAAKEALLEKLEIMGQLLERNVVLENSLSDLGAELEGVRGKLKSLEESYQSLSEDKSNIVVEKANLLGQLQVTTDNLSQVSEKNTVLENSLFDAHVKLEILKQKSKSFEDSCQVLADEKSALISEKGTLISQMEITEKTLQALEMKYTDLEEKYSLMEKERESTLQKVEELNVSLALQDQEHFIFVQKNGKQLHAMRSQIQLLQEESKNKNKEFGEEQDRAFDSEIKMFILLKCVQDLEENNLSLFNDGHKLQEALKLSESLIHVLEQEKTENQMKIKSLSDQNNRLKNGMHQLLKFAGLSLHRGSENGQEQTYFDSIQKTFEGTNCALIENEEKNMKLVVEISVLVTLLRQFKTEMANLEAEKYVIHQELGVRDERILGLQNEAQKILEVNETLRCKVIEQDTNESGLRTQLENIHYELSVAQEAFRTLQMENSVVLEEKKSLMNVNFHIKNKILASEEENEVLMTEVLSQSILSQTLKDYIDEKHEEMSMVEKKLEEVGKENVELKKTLEKSEHELKTVISVRDHLNSDLVNTSNLLQLKEKEHKEAAQQIMMLENDKMVLSETVADLQRDYSAVKMTKDQQGQQILNLIQENDHLCKENQILDVKMQQLTDNLEKTEEKAQFLETEGSLLYGDLQTSAIYEALLEEKIHESTEICSSLQVEINSKDVTNEILKEKTYILERENGDLKACVTAYGLALESLKDSIISLEDQTCTRTKVPESDNENTKGDESVTMERDAFVELQDLQSKVKVIEKAVVEMQTRSTQQKLDSDAKLEAAMKQIEELSSQKNPRRSNSKPKSRSEISLADPKDIMLDEASECSSYGISKRGTIDGEIWETADDSRTMFKHNPTPSDVSLDNIVVDKLEVSKRLKESRNDENKRKVLERLNSDVLKLTNLQITIEDLKRKVEITLRSRRGKAMIECETLKGQLMEAESAIQKLYELNGKFVKQLEGNDAETSRSTYDESEESESMRRKKVAEQARRVSEKIGRLQLEIQRIQFVLVKLDENEHEAAGKTRFLDSNKRVLLKDYLYGGGRTKATVSSRRKKSHFCACVEPSTKGD 1650
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02193 1650 Coils Coil 1357 1377 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 104 172 - -
Mimi16g02193 1650 Coils Coil 529 549 - -
Mimi16g02193 1650 Coils Coil 931 951 - -
Mimi16g02193 1650 Coils Coil 781 808 - -
Mimi16g02193 1650 Coils Coil 851 871 - -
Mimi16g02193 1650 Coils Coil 721 755 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 150 172 - -
Mimi16g02193 1650 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779(InterPro)
Mimi16g02193 1650 Coils Coil 216 332 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 1372 1400 - -
Mimi16g02193 1650 Coils Coil 616 650 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 1547 1563 - -
Mimi16g02193 1650 PANTHER PROTEIN NETWORKED 4A 312 914 IPR051861 -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 104 130 - -
Mimi16g02193 1650 Coils Coil 501 521 - -
Mimi16g02193 1650 Coils Coil 181 208 - -
Mimi16g02193 1650 Coils Coil 1071 1105 - -
Mimi16g02193 1650 Coils Coil 340 367 - -
Mimi16g02193 1650 Coils Coil 1332 1352 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 1385 1400 - -
Mimi16g02193 1650 Coils Coil 1127 1161 - -
Mimi16g02193 1650 Coils Coil 1483 1503 - -
Mimi16g02193 1650 Coils Coil 375 416 - -
Mimi16g02193 1650 Coils Coil 1512 1532 - -
Mimi16g02193 1650 MobiDBLite consensus disorder prediction 1543 1563 - -
Mimi16g02193 1650 Coils Coil 582 602 - -
Mimi16g02193 1650 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779(InterPro)
Mimi16g02193 1650 Coils Coil 1190 1217 - -
Mimi16g02193 1650 Coils Coil 466 493 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02193 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
421290 Mimi16g00471 Mimi16g02193
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:85194070 Mimi6g00497 Mimi-Chr6:31276393 dispersed
Mimi Mimi-Chr16:85194070 Mimi14g00060 Mimi-Chr14:3055064 transposed
Mimi Mimi-Chr16:85194070 Mimi14g01874 Mimi-Chr14:41073071 transposed