AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02195 ATGGACAGTTTATGGCAGGAGTTCAATTCCACCGGCGCCTTTCAGTTGCCGGAGAGTCCACGGAAGCCGATGGAGTTCTTATCGAGGTCATGGAGTGATGCTACTCTTAAAACTCTGCATTCTCCGCCGTCTCCGTTGGTTTCTAGGTCCGGAACGGCCGCTGTTACCAGTAGAACTAGCACAAATTCCGATATTGCACCGGAGACTGACCGTGTTTACGGCGTCGATGCGGTGGAGGAGTCAGTTCCGGTGACGGAAACGATATCAGGAAACACGTTTTCGTTCGCTTCATCCGCTACTTCGCAACTCGTGCTTGAACGAATCATGTCTCAATCGGATGTGTCGCCGTTAGCTTCAGGGAGACTATCACACAGTAGTGGACCACTGAATCCGTCGCACATGGAAGACACCGACGGTCCACACATCTCACCGTCCGACGAGTACGACGACGTCGTTAAGTTCTTGCGAGCAAACAACACCCTGCAACCGTTGTTTGCCAATGGTCGGAATGGATATGGGGCAGGTGGGTGTAGCACCACTCCTGCTGGAAAGACGGTAGGACGGTGGTTAAAGGAGAGGAGGGAGAAAAAGAAAGAAGAGACACGAGCCCACAACGCGCAGCTCCATGCTGCCGTTTCGGTTGCTGGAGTGGCAGCTGCAGTGGCAACTATTGCAGCCGCCACTGCAGCAGCAACAACCACTAGTAAAGACGAACAAATGGCAAAGACCAATATGGCGGTGGCCTCGGCTGCAACTTTGGTGGCTGCACAGTGCGTTGAGGCAGCTGAGGCCATGGGAGCTGAACGAGAACACCTCATTGCCGCAGTTAGTTCTGCAGTTAATGTCAAATCCCATGGAGATATATTAACTCTAACAGCTGCAGCTGCAACTGCTCTTCGTGGAGCGGCGACATTGAAGGCAAGGGCATTAAAGGAAGTGTGGAATATCGCGGCAGTAATACCAGTGGAGCGTGGACTTAAAGAAAGTAAAAGCCAAGGAAAGAACAGTGGCTACTGTGAGCAAATTCCTTCTGAAGAGAACTTTTTGGGTCTTTGTAACCAAGAACTCCTGGCCCGAGGGAGCGAGCTTCTCAAACGCACCCGTAATGGTGATTTACACTGGAAAATTGTGTCGGTTTATATCCATCGAACGGGTCAGGTGATGCTAAAGATGAAGAGTAAATATGTTGGTTCTACCATCACTAAAAAGAAGAAAAATGTGGTATTGGAGGTGTGCAAGAACATGCCGGCATGGCCAGGGAGACATCTATTTGATGGCGGCGAGGAGCGACATTATTTCGGGTTAAGGACGGTCGGACGTGGATTGGTGGAGTTCGAGTGTAGGACACAAAGAGAATATGATATGTGGACTCAAGGTGTTTCTAGGCTTCTTTCCATTGTAAATGAAAGAAAGTCATCCACCAAGTAA 1428 50.07 MDSLWQEFNSTGAFQLPESPRKPMEFLSRSWSDATLKTLHSPPSPLVSRSGTAAVTSRTSTNSDIAPETDRVYGVDAVEESVPVTETISGNTFSFASSATSQLVLERIMSQSDVSPLASGRLSHSSGPLNPSHMEDTDGPHISPSDEYDDVVKFLRANNTLQPLFANGRNGYGAGGCSTTPAGKTVGRWLKERREKKKEETRAHNAQLHAAVSVAGVAAAVATIAAATAAATTTSKDEQMAKTNMAVASAATLVAAQCVEAAEAMGAEREHLIAAVSSAVNVKSHGDILTLTAAAATALRGAATLKARALKEVWNIAAVIPVERGLKESKSQGKNSGYCEQIPSEENFLGLCNQELLARGSELLKRTRNGDLHWKIVSVYIHRTGQVMLKMKSKYVGSTITKKKKNVVLEVCKNMPAWPGRHLFDGGEERHYFGLRTVGRGLVEFECRTQREYDMWTQGVSRLLSIVNERKSSTK 475
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02195 475 MobiDBLite consensus disorder prediction 40 66 - -
Mimi16g02195 475 Pfam Auxin canalisation 17 324 IPR008546 -
Mimi16g02195 475 Pfam Plant pleckstrin homology-like region 362 467 IPR013666 -
Mimi16g02195 475 PANTHER EXPRESSED PROTEIN 16 469 IPR040269 GO:0009734(PANTHER)|GO:0010087(PANTHER)|GO:0010305(PANTHER)
Mimi16g02195 475 MobiDBLite consensus disorder prediction 116 132 - -
Mimi16g02195 475 MobiDBLite consensus disorder prediction 116 140 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02195 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
129635 Mimi16g02195 Mimi17g02285
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:85252158 Mimi19g01519 Mimi-Chr19:70809832 dispersed
Mimi Mimi-Chr16:85252158 Mimi17g02285 Mimi-Chr17:81099094 wgd