AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02196 ATGATGCTGCATGCTGAATCCTCAACGAAGCCTATTACTTGTTTCAACGTCGGTGGCTACAAAGTCGAAACGAAAAGTGTACCAAAATCCTCCAGTTCTACGACGCCAAACCCGCCTTTGTTCGTCGTTTACCCTACCGAAAAAGGGACGTATCCTGTCATACTCTTTCTCCATGGCTTCTCCATCCCTAATACGTCTTATAGCGACCTCTTCGAGTTTATCGCGTCTCATGGTTACATAATCGTCGCACCCGGTCAAACTTTGTTGGGGTTCTTGACAGGTATGTGCGTGTTTTCCGCAGTTGGTGATGTGGATGACGCAGCTGAGACAGCCAACTGGATAAACAACAACCAAGGCGAAAACCTCAAACTTGTGCTCCCACATGATGTGACACCGGATCTTGAGAACGTAGCACTAGCCGGCCATAGCAAAGGCGGCAAAGCCGCATTTGCTCTAGCTCTTGGTCATGCAACCACAAGCCTAAAATTCAAGGTTCTTATTGGGTTAGATCCTGTTGCAGGTCCAAGTACCTCCAACAGGCTCGACCCCAAGATCTTAAACTACATACCACATGATTTCAACATACCAATACCTAAAGCACTAATTGGAACAGGCTTGGGTGATGACGGGTTCTGCGGATGTTTCCCACCCGCAGCCCCTTGGGGGTGCAACCATCCGTTTTTCTTTAACGAATGCAAACCCCCCACTTGTTATTTTGTAGCCAAGGACTTTGGTCACATGGACATGCTTAATAATTGGATGGCTCGATTGTCGGGTATGTTTGTATGCAAGTCCGGTAAGGGTTCGTATGCTGATATGAGGAGAGCTTGTGGTGGCATTTTTGTTGCCTTTCTCAAGAATTACATGTTTAATGATGCTGAAGATCTCACCGCAATTATTAAGTCATCCGTAACTGAGCTTTATCCTAGATTCCTAGATGAACTCACACTCGGCGGCTTAGACTTGTTTATCTCATGA 978 46.32 MMLHAESSTKPITCFNVGGYKVETKSVPKSSSSTTPNPPLFVVYPTEKGTYPVILFLHGFSIPNTSYSDLFEFIASHGYIIVAPGQTLLGFLTGMCVFSAVGDVDDAAETANWINNNQGENLKLVLPHDVTPDLENVALAGHSKGGKAAFALALGHATTSLKFKVLIGLDPVAGPSTSNRLDPKILNYIPHDFNIPIPKALIGTGLGDDGFCGCFPPAAPWGCNHPFFFNECKPPTCYFVAKDFGHMDMLNNWMARLSGMFVCKSGKGSYADMRRACGGIFVAFLKNYMFNDAEDLTAIIKSSVTELYPRFLDELTLGGLDLFIS 325
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02196 325 Gene3D alpha-beta hydrolase 7 306 IPR029058 -
Mimi16g02196 325 SUPERFAMILY alpha-beta-Hydrolases 37 253 IPR029058 -
Mimi16g02196 325 PANTHER CHLOROPHYLLASE-2, CHLOROPLASTIC 6 302 - -
Mimi16g02196 325 Pfam Chlorophyllase 8 302 IPR017395 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02196 K08099 chlorophyllase [EC:3.1.1.14]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:85283328 Mimi17g01745 Mimi-Chr17:72056175 dispersed