Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mimi16g02198	ATGGCTGCAAAATCTTTAATCAAAGTCCCCGATCCACCAATTCTTCCGTTTTTTAAACCTGTTGATTATGTAGAAGTTTTAGCTCAAATCCACAAAGAACTAGAGTCGTGCCCACCACATGAGCGCACAAACCTCTATTTATTACAATTTCAAGTCTTTAAAGGCCTTGGTGACATTAAATTAATGAGAAGAAGCCTTAGATTAGCTTGGCTCAATGCAAGTACAGTTCATGAACAACTTGTTTTTGGGGCATGGTTAAAGTACGAAAAACGAGGTGAAGAACTTATATCGGATTTACTCTCTTCATGTGGTAAATGTTCCAAAGAGTTTGAATTGATAGATATTGGTTCTGAGCTACCATCTGAAGTAAACACTAGTTATACTGATGGTGCGATGATTAATCAGAAGACTAATGTATCAGGAATGGTTTCATTTAAAATTGGGGATGAAAAAATAATGTGTGATAGACAAAAAATGGCGACCCTTTCGCCTCCTTTTCGTTCTATGCTTAATGGGTGTTTTCTTGAATCAGTTTCTGAAGACATAGATTTGTCAAAAAATGATATTTCACCAATGGGTATGAAGGTGATAAGTGAATTTAGCTCAACAGGTATTTTACCTGATTTACCAACAAATCTTCTATTAGAAATTATGATGTTTTCAAGTAAGTTTTGTTGTGAGAATCTTAAAGATTCTTGTGATAGGAAACTTGCAAAGTCTGTTTCATCAAGAAATGATGCAGTTGAGCTTATGGAATATGCTCTTGAAGAGAATTGTCCAGTTCTTGCAGCCTCTTGTTTGCAGGTTTTTCTTCAAGAACTCCCGGATTCTCTTAATGATGAACGGGTTGTTGACTTGTTGACCAGTGTTGACCGTTTACATAGATCGATTATGGTGGGGCCCTCTTCGTTTTCACTCTACTGTTTATTAAGCCAAGTTGCTATGGATCTCGATGCTGGATCTGATAAATCCGCTCTTTTTTTGGAACAATTAGTGGATTGTACGGAAAATAGTCAACAAAAGATGGTGGCATATCATATGTTAGGATGTGTGAAATTACTTAAGAAAGAATATGATGAAGCTCAAAGATTCTTTGATGTTGCATTGACGGAAGGACATGTTTATTCTGTCATTGGTTTGACTAGAATAGGTCAAATTAAGGGTGAAAAGCTTGAATCTTTCAAGAAACTTAGCTCGGTTATCTCAAATTACACTCCTCTGGGGTGGATGTATCAAGAACGGTCTTTATATTGTGAAAATAATGTAAAAATATGGGAAGATCTTGAAAAAGCAACTGAATTGGATCCAACTTTGACCTACCCATATATGTATCGTGCAGCTTCTTTAATAAAAAAGCAAAATGTTCAAGATTCACTTGCCGAAATCAACAAGATTCTTGGTTTTAAACTTGCGGTTGAATGTTTAGAATTGAGGTTTTGTTTTTATTTAGTTCTTGAAGATTATCAATCGGCTATCTGTGATGTTCAAGCAATTCTTACAATTTGTCCTGAATATCGGATGTTTGAAGGGCGGGTTCCTGCTACACAATTTCAAACTTTGGTGCGTGAGCATGTTCCAAACTGGACCACTGCAGATTATTGGTTGCAGTTATATGATCGGTGGTCTGCTGTTGATGATATCGGGTCACTTTCTGTTATATATCAAATGCTTGAGTCTGAAACGGCTAAAGGAGTTTTATATTTTAGGCAGTCTTTGCTTCTCCTCAGGTTAAATTGCCCGGAAGCAGCAATGCGAAGCTTGCAATTGGCCCGCCAACATGCATCAAGTGAACATGAACGTTTAGTTTATGAGGGTTGGATATTATATGATACGGGTCATTGTGATGAAGGCTTAAAAAAGGCGGAAGAATCTATTAACTTGAATAGATCTTTCGAGGCCTTTTTTCTAAAAGCTTATGCTTTAGCGGATTCTAGCCAAGATCCTACTTGTTCTTCAACTGTTGTAGCACTTCTTCAAGACGCCCTAAAATGCCCTTCCGATAGGCTTCGCAAAGGCCAGGCATTGAACAATCTTGGAAGTGTTTATGTGGACTCTGGGAAACTGGACCTTGCAGCTGATTGCTACATTAATGCTCTTAAAATTCGACACACACGGGCCCACCAGGGACTAGCGCGTGTCCATTATTTAAAAAACGACAAGCCAGCTGCTTATGAAGAAATGACAAAATTGATTGAAAATGCACGGAACAATGCATCTGCTTATGAAAAAAGATCAGAGTATTGTGAAAGAGAACAAACAAAAATAGATCTTGAAATGGTCACTCATTTGGATCCTCTTCGGGTTTACCCATACAGATACCGCGCAGCAGTCTTGATGGACAACCACAAGGAGAAAGAAGCCATAGCTGAGCTTTCAAGGGCGATAGCGTTCAAAGCGGACATGCATTTATTGCATTTACGGGCTGCGTTTCATGAGCATATTGGGGATGTTTCAGGTGCCATGCGGGACTGTCGGGCCGCCCTCTCTTTTGACCCGAATCATCAAGAAATGCTTGAGCTTCGAAGCCGTGTAAACAGCCAAGAACCTTAA	2550	38.75	MAAKSLIKVPDPPILPFFKPVDYVEVLAQIHKELESCPPHERTNLYLLQFQVFKGLGDIKLMRRSLRLAWLNASTVHEQLVFGAWLKYEKRGEELISDLLSSCGKCSKEFELIDIGSELPSEVNTSYTDGAMINQKTNVSGMVSFKIGDEKIMCDRQKMATLSPPFRSMLNGCFLESVSEDIDLSKNDISPMGMKVISEFSSTGILPDLPTNLLLEIMMFSSKFCCENLKDSCDRKLAKSVSSRNDAVELMEYALEENCPVLAASCLQVFLQELPDSLNDERVVDLLTSVDRLHRSIMVGPSSFSLYCLLSQVAMDLDAGSDKSALFLEQLVDCTENSQQKMVAYHMLGCVKLLKKEYDEAQRFFDVALTEGHVYSVIGLTRIGQIKGEKLESFKKLSSVISNYTPLGWMYQERSLYCENNVKIWEDLEKATELDPTLTYPYMYRAASLIKKQNVQDSLAEINKILGFKLAVECLELRFCFYLVLEDYQSAICDVQAILTICPEYRMFEGRVPATQFQTLVREHVPNWTTADYWLQLYDRWSAVDDIGSLSVIYQMLESETAKGVLYFRQSLLLLRLNCPEAAMRSLQLARQHASSEHERLVYEGWILYDTGHCDEGLKKAEESINLNRSFEAFFLKAYALADSSQDPTCSSTVVALLQDALKCPSDRLRKGQALNNLGSVYVDSGKLDLAADCYINALKIRHTRAHQGLARVHYLKNDKPAAYEEMTKLIENARNNASAYEKRSEYCEREQTKIDLEMVTHLDPLRVYPYRYRAAVLMDNHKEKEAIAELSRAIAFKADMHLLHLRAAFHEHIGDVSGAMRDCRAALSFDPNHQEMLELRSRVNSQEP	849

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mimi16g02198	849	SMART	tpr-5	342	375	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SMART	tpr-5	564	597	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SMART	tpr-5	672	705	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SMART	tpr-5	472	505	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SMART	tpr-5	598	631	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SMART	tpr-5	801	834	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	Pfam	Tetratricopeptide repeat	673	701	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SUPERFAMILY	POZ domain	143	240	IPR011333	-
	Mimi16g02198	849	Gene3D	Tetratricopeptide repeat domain	559	754	IPR011990	GO:0005515(InterPro)
	Mimi16g02198	849	Gene3D	Tetratricopeptide repeat domain	291	509	IPR011990	GO:0005515(InterPro)
	Mimi16g02198	849	PANTHER	ETO1-RELATED	3	848	IPR044631	GO:0010105(InterPro)
	Mimi16g02198	849	Gene3D	Potassium Channel Kv1.1; Chain A	142	281	IPR011333	-
	Mimi16g02198	849	Coils	Coil	724	751	-	-
	Mimi16g02198	849	ProSiteProfiles	TPR repeat profile.	672	705	IPR019734	GO:0005515(InterPro)
	Mimi16g02198	849	SUPERFAMILY	TPR-like	343	631	IPR011990	GO:0005515(InterPro)
	Mimi16g02198	849	SUPERFAMILY	TPR-like	656	842	IPR011990	GO:0005515(InterPro)
	Mimi16g02198	849	Gene3D	Tetratricopeptide repeat domain	755	848	IPR011990	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mimi16g02198	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Mimi	Mimi-Chr16:85321841	Mimi16g02420	Mimi-Chr16:89693767	dispersed