Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g02228 | ATGTTGGCTCGATTGGCATCCAGACGTCTGCTCGAGATCCGTCAAGCTGTCCGTCAGTTTCCTCAGACAACTCGAGCGTTATCTACTGCTCTAAACTATCACCTTGATTCTCCTGATAATAATCCCGACCTTCCATGGGAATTCAGCGATGCTAACAAACCTAAGGTAAAGGAGATATTGTCTCATTATCCATCAAATTACAAGCAGTCGGCAGTCATTCCTCTGCTGGATCTTGCACAACAGCAGCATGGGGGATGGCTTCCTGTTTCGGCAATGAATGCGGTGGCTAAAGTGATAGAAGTTGCTCCTATTCGTGTGTATGAGGTCGCAACTTTTTATTCAATGTTTAACAGAACAAAGGTTGGCAAATATCATCTTTTGGTCTGTGGAACAACTCCTTGTATGATCCGTGGGTCACGAGATATTGAAGATGCACTACTGAAGCACTTGGGAGTTAAACGGAATGAGGTTACAAAAGATGGCTTATTCTCTGTTGGAGAGATGGAATGCATGGGTTGTTGTGTAAATGCTCCTATGATTACTGTGGCAGATTATTCAAATGGATCCGAAGGATATACATATAACTACTATGAAGATGTAACGCCAAAGAGAGTTGTAGAGTTAGTCGAGGCTCTAAGACGTGGAGAGAAGCCACCGCGTGGCACACAGAACCCACAGAGGATCAACTGCGGACCTGAAGGAGGGAATACTACATTGTTGGGTGAGCCCAAACCACCCCCATGCCGTGACTTAGATGCTTGCTAA | 765 | 45.1 | MLARLASRRLLEIRQAVRQFPQTTRALSTALNYHLDSPDNNPDLPWEFSDANKPKVKEILSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRTKVGKYHLLVCGTTPCMIRGSRDIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPMITVADYSNGSEGYTYNYYEDVTPKRVVELVEALRRGEKPPRGTQNPQRINCGPEGGNTTLLGEPKPPPCRDLDAC | 254 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g02228 | 254 | PIRSF | NDH-1-E | 32 | 253 | IPR002023 | GO:0016491(InterPro) | |
| Mimi16g02228 | 254 | FunFam | NADH-quinone oxidoreductase subunit E | 46 | 120 | - | - | |
| Mimi16g02228 | 254 | SUPERFAMILY | Thioredoxin-like | 48 | 224 | IPR036249 | - | |
| Mimi16g02228 | 254 | FunFam | NADH dehydrogenase [ubiquinone] flavoprotein 2 | 121 | 230 | - | - | |
| Mimi16g02228 | 254 | CDD | TRX-Fd-NuoE | 123 | 212 | IPR042128 | - | |
| Mimi16g02228 | 254 | PANTHER | NADH DEHYDROGENASE UBIQUINONE FLAVOPROTEIN 2, MITOCHONDRIAL | 25 | 254 | - | GO:0003954(PANTHER)|GO:0005747(PANTHER)|GO:0006120(PANTHER)|GO:0045272(PANTHER) | |
| Mimi16g02228 | 254 | Gene3D | - | 46 | 119 | IPR041921 | - | |
| Mimi16g02228 | 254 | Gene3D | Glutaredoxin | 121 | 230 | - | - | |
| Mimi16g02228 | 254 | NCBIfam | NADH-quinone oxidoreductase subunit NuoE | 56 | 212 | IPR002023 | GO:0016491(InterPro) | |
| Mimi16g02228 | 254 | MobiDBLite | consensus disorder prediction | 214 | 254 | - | - | |
| Mimi16g02228 | 254 | Pfam | Thioredoxin-like [2Fe-2S] ferredoxin | 56 | 212 | - | - | |
| Mimi16g02228 | 254 | ProSitePatterns | Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. | 160 | 178 | IPR002023 | GO:0016491(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g02228 | K03943 | NADH dehydrogenase (ubiquinone) flavoprotein 2 [EC:7.1.1.2] | ||||
| Mimi16g02228 | K00334 | NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 128785 | Mimi12g00491 | Mimi16g02228 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr12:10234103 | Mimi16g02228 | Mimi-Chr16:85964533 | dispersed |