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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi16g02236 ATGATGTATCAATCTAGGGGTCTGGCAGCTGCCACCCTTGTGACTTATTTGATAGCCGCCGACAAGAGGTCAGGCTCTAGATCAGGGTTTGAAATCGAGGGAGCAAAAGCTGCTGCAAACTTATCATCGAAGATTAGGCAGATTCGGTGTCTCAAGTTTAAAACGGATCAGGCACAAGATGCTAAAAAGATGGAGAAGCTTAACAACATATTCTTTACCCTCATGGCTCGTGGTCCTGAAACTGATATTACAGAAGTCACTGGAAAAGAACAAACAGCGCAGCCTGCCAAAAGAGGAAGGGGAAGGAAGCAATGA 315 45.4 MMYQSRGLAAATLVTYLIAADKRSGSRSGFEIEGAKAAANLSSKIRQIRCLKFKTDQAQDAKKMEKLNNIFFTLMARGPETDITEVTGKEQTAQPAKRGRGRKQ 104
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi16g02236 104 SUPERFAMILY Signal recognition particle alu RNA binding heterodimer, SRP9-14 48 81 IPR009018 GO:0006614(InterPro)|GO:0008312(InterPro)|GO:0048500(InterPro)
Mimi16g02236 104 Gene3D Signal recognition particle alu RNA binding heterodimer, srp9-1 30 87 IPR009018 GO:0006614(InterPro)|GO:0008312(InterPro)|GO:0048500(InterPro)
Mimi16g02236 104 PANTHER SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN 49 104 IPR039914 GO:0005786(PANTHER)|GO:0006614(PANTHER)|GO:0006614(InterPro)|GO:0048500(InterPro)
Mimi16g02236 104 MobiDBLite consensus disorder prediction 82 104 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi16g02236 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr16:86074078 Mimi16g02242 Mimi-Chr16:86212780 proximal