Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi16g02272 | ATGGCAACTGGTTGTAGAGGAAAGAGTTCATGGCCAGAGCTTGTAGGAGCAGACGGAGAAGCTGCGGCTGCTACAATCGAGCGAGAGAATCCACGGGTCGATGCTATCGTGATATTGGATGGAACTGGTACCCCTAGGGACTTTCAGTGCGACCGTGTGTGGGTGTGGGTGAACTCTGATGGAGTGGTGATTCGAACCCCTATCATTCGATGA | 213 | 52.58 | MATGCRGKSSWPELVGADGEAAAATIERENPRVDAIVILDGTGTPRDFQCDRVWVWVNSDGVVIRTPIIR | 70 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi16g02272 | 70 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 4 | 69 | IPR036354 | - | |
| Mimi16g02272 | 70 | ProSitePatterns | Potato inhibitor I family signature. | 11 | 22 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Mimi16g02272 | 70 | Pfam | Potato inhibitor I family | 8 | 69 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Mimi16g02272 | 70 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 4 | 69 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Mimi16g02272 | 70 | Gene3D | Trypsin Inhibitor V, subunit A | 1 | 69 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi16g02272 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr16:86366327 | Mimi16g02272 | Mimi-Chr16:86787465 | dispersed | |
| Mimi | Mimi-Chr16:86742645 | Mimi16g02272 | Mimi-Chr16:86787465 | dispersed | |
| Mimi | Mimi-Chr16:86787465 | Mimi16g02277 | Mimi-Chr16:86829770 | dispersed | |
| Mimi | Mimi-Chr16:86781241 | Mimi16g02272 | Mimi-Chr16:86787465 | tandem | |
| Mimi | Mimi-Chr16:86787465 | Mimi16g02273 | Mimi-Chr16:86794837 | tandem |