Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00041 | ATGTCATCTTCCTCCCTAATTCCTCTCACCTCCACATTCACCAGTCTTCCATCCACAAATACCAATCGAGCCATCAAGACTCGAACCAACCAAACTCATGGGTTCAGAGTCTCATGCAACCACGCACCAGATAACCAAAACGACAAGAAACTCATACTCCCTGAAGCCCAGAAGCTCCTACTGCCCAATGTAGACCGTAGGAACCTGCTCGTGGGGCTCGGTGGTCTCTACACCGCTACGAACCTCACTTCCAAGCCATTGGCTTTGGCTGCACCCATCACAGCTCCAGATATCACGTCTATATGCAAAGATGCCAGTGCTGGCATCGGCAACCAAGACAAGGCTCTACGGTCACGAAAATGCTGTCCACCAAGCCTCGGGAAGACGATCAAAAACTTCGTCTTCCCGACTGACAAGAAGGTCAGGATGCGATGGCCCGCTCACGCCGGGACGAAAGAGCAGGTGGACAAATACCGAGCCGCGATCCAAGCGATGCGAGATCTCCCGGATGACCACCCGCACAGCTTCGTGAGCCAAGCTAAGATCCACTGTGCCTACTGCAACGGAGGTTACACGCAGGTCGATAGCGGTTTTGCGGACAAAGAGATCCAGATTCACAACTCGTGGCTCTTCTTCCCGTTCCACCGCTGGTACCTCTATTTCTATGAGAGAATCCTTGGGAAGCTGATAAAAGATCCAGATTTCGCCTTACCGTTCTGGAAGTGGGATGAACCGGCCGGAATGCCGATCCCGGAGATGTTTGTGCCAGAAACAATTGATGGTAAACCGAACCCGTTGTATGATGTTTACCGGAGTGCCGATCATATCAAAGACGGAATCGTTGATCTTGACTATAGAGAAATTAATGGTAAACTCGATAAAGATATCCCTTATAAGCAACAGGTATTATGCAATCTGAGTACGGTTTACCGTGATTTGGTTCGTAACGGTGGTGACACATTGAGCTTCTTCGGTGGCGTGTATGTTGCCGGTAATGATCCGGTCAAGAACGGTGCCGAATCTGTCGGGTCGGTCGAAGCAGGATCTCACACGGCCGTGCACCGATGGGTCGGTGACTCAAAAAACCCAAATGGCGAGGACATGGGTAACTTCTACTCCGCGGGGTATGACCCCGCGTTCTACATTCATCACTCGAATGTGGATCGAATGTGGAAGCTATGGAAGGATTTGCGTCTTCCGGGACACGTTGACCCAACCGAACCGGACTGGCTGGACGCTTCTTATGTGTTCTATGACGAGAATGAGGACCTTGTGCGCGTGTATAACAGGGACTCGGTTAGCCTAGACAAGCTCAAGTATAACTATATTGAGAACTCGAAGGAGGTCTTCCCATGGCGCAACAGTCGGCCAGCGAAGCGTAACAAGAACTTGCAGACTGCAACCACCACTGAAGTCAAGAAGGTGGACCAGATTAAGTTCCCAGTGAAACTGGACAAGATCTTGAAGGTTGGTGTGAAGCGACCCGCGGTGAACCGAAGCGCTGAAGAGAAGGTGAAAGCGAATGAAGTGTTGGTGATCAAGGGGATTAGGTATGATAGTGAGAAGTTTGTGAAGTTTGATGTGTTTGTGAATGACAAACTCAAAGATGGTGTGTTCACTACGCCTTGCGATCCGGAGTACGCAGGTGGGTTCGCTCAGATTCCGCATGGTGGTATGAAAAACATGTTTATGGGGAGTTCAGCTCGGTTTGGGCTAACCGAGTTGTTGGAGGACACAAACACAGATGGGGATGAGTATGCGACCGTGACATTGGTGCCGAGGACCGGGTGTGATGATCTAACCGTTGGCAAAATCGAGATCATTTTGGTTCCGGTGGCTGCAGTCTAA | 1848 | 50.49 | MSSSSLIPLTSTFTSLPSTNTNRAIKTRTNQTHGFRVSCNHAPDNQNDKKLILPEAQKLLLPNVDRRNLLVGLGGLYTATNLTSKPLALAAPITAPDITSICKDASAGIGNQDKALRSRKCCPPSLGKTIKNFVFPTDKKVRMRWPAHAGTKEQVDKYRAAIQAMRDLPDDHPHSFVSQAKIHCAYCNGGYTQVDSGFADKEIQIHNSWLFFPFHRWYLYFYERILGKLIKDPDFALPFWKWDEPAGMPIPEMFVPETIDGKPNPLYDVYRSADHIKDGIVDLDYREINGKLDKDIPYKQQVLCNLSTVYRDLVRNGGDTLSFFGGVYVAGNDPVKNGAESVGSVEAGSHTAVHRWVGDSKNPNGEDMGNFYSAGYDPAFYIHHSNVDRMWKLWKDLRLPGHVDPTEPDWLDASYVFYDENEDLVRVYNRDSVSLDKLKYNYIENSKEVFPWRNSRPAKRNKNLQTATTTEVKKVDQIKFPVKLDKILKVGVKRPAVNRSAEEKVKANEVLVIKGIRYDSEKFVKFDVFVNDKLKDGVFTTPCDPEYAGGFAQIPHGGMKNMFMGSSARFGLTELLEDTNTDGDEYATVTLVPRTGCDDLTVGKIEIILVPVAAV | 615 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00041 | 615 | ProSitePatterns | Tyrosinase and hemocyanins CuB-binding region signature. | 377 | 388 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | PRINTS | Tyrosinase copper-binding domain signature | 349 | 360 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | PRINTS | Tyrosinase copper-binding domain signature | 376 | 394 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | PRINTS | Tyrosinase copper-binding domain signature | 206 | 223 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | PRINTS | Tyrosinase copper-binding domain signature | 237 | 242 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | PIRSF | PPO-plant | 1 | 611 | IPR016213 | GO:0004097(InterPro)|GO:0046148(InterPro) | |
| Mimi17g00041 | 615 | Gene3D | - | 91 | 448 | IPR008922 | - | |
| Mimi17g00041 | 615 | ProSitePatterns | Tyrosinase CuA-binding region signature. | 206 | 223 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | Pfam | Common central domain of tyrosinase | 174 | 396 | IPR002227 | GO:0016491(InterPro) | |
| Mimi17g00041 | 615 | Pfam | Protein of unknown function (DUF-B2219) | 480 | 607 | IPR022740 | GO:0004097(InterPro) | |
| Mimi17g00041 | 615 | SUPERFAMILY | Di-copper centre-containing domain | 119 | 442 | IPR008922 | - | |
| Mimi17g00041 | 615 | PANTHER | TYROSINASE FAMILY MEMBER | 64 | 576 | IPR050316 | - | |
| Mimi17g00041 | 615 | Pfam | Polyphenol oxidase middle domain | 404 | 457 | IPR022739 | GO:0004097(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00041 | K00422 | polyphenol oxidase [EC:1.10.3.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:1683496 | Mimi17g00405 | Mimi-Chr17:13457593 | dispersed | |
| Mimi | Mimi-Chr17:1683496 | Mimi17g00042 | Mimi-Chr17:1746578 | tandem |