AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00044 ATGGGGAATAAGCTGGGTAGAAGAAGACAGTTAGTTGATGAAAAGTATACAAGGCCTCAAGGGCTGTATCAACACAAAGATGTAGATCACAAAAAGCTTAGGAAGCTTATACTTGATTCGAAACTCGCTCCATGTTATCCCGGAGATGATGACTGCAGTTGTGATCTTGAAGAATGCCCAATTTGCTTCTTGTATTATCCGAGTCTAAATAGATCAAGATGTTGCACAAAAGGCATCTGTACAGAGTGTTTTTTGCAGATGAAGACACCTAATTCTACACGCCCTACGCAATGTCCCTTTTGTAAAACTTTGAACTATGCTGTCGAGTATAGAGGCGTGAAAACTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGAGTGATAGAAGCAAAAATAAGAATAAGACAGCAAGAAATTCAAGATGAAGAGGAAAGAATGCTAAAAAACAAGAGACGATATCTTCAAGCAGGGTGTTTGAATCAAGTGAGGCTGAATATTTCTCCAGAGGAGGTAGATGATGAGTTTGATCTTGATCCTGAAAACATAATGCTCATGGAAGCCATCTGGTTGTCTTTTCAGGAGGATAACAAGCACAAACTCAAAAACTCCAGTTACGGTGATGCCACACAATTAGCAAAATACGCGGCAGAAGTTCGTCTTTTAGCATCCATGGCCCCACAAGCTGAATATTCTGCTTCATCCTCGTCTCCTTCTGGTGGACTTGCATGTGCCATAGCCGCCCTTGCTGAACGCCAGCAAACGGTAGGCGAGTCATCAGCTAATTACAATAGTTATAATGGGAATTTAACAACATACAACGTGCATCCCGATCATAGCCAAACAGGGTTGTTATCACTTGATAACCACCTGCATATCAATCATGATAATTCAGAAGAATTGGGTGAAACTGGATTTGGGTATGATGGTAATTTGAGGACAGTAGATGATAATGATGATGTAAGCAGAAGGCAGTATGGTCATCTTGATGACGTGGACAATGGTGGTGGGAATATAGTTCCCGAGAGCTTTGAAGAACAGATGATGTTAGCCATGGCTGTTTCATTGGCTGAGGCTCGAGCTAGGGCTAATAGTACACCGGAGGTTGCCTGGATTTAG 1122 41.8 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRIRQQEIQDEEERMLKNKRRYLQAGCLNQVRLNISPEEVDDEFDLDPENIMLMEAIWLSFQEDNKHKLKNSSYGDATQLAKYAAEVRLLASMAPQAEYSASSSSPSGGLACAIAALAERQQTVGESSANYNSYNGNLTTYNVHPDHSQTGLLSLDNHLHINHDNSEELGETGFGYDGNLRTVDDNDDVSRRQYGHLDDVDNGGGNIVPESFEEQMMLAMAVSLAEARARANSTPEVAWI 373
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00044 373 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Mimi17g00044 373 PANTHER PROTEIN SIP5 169 273 IPR039301 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00044 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:1790315 Mimi17g00402 Mimi-Chr17:13314551 dispersed