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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00105 ATGGCGGATTCCGATAAACAACCTCAATTTCTGTTCAAACAACACTCGTGGTCGCCAGACATCCACCGAGACATAGAATGGCAGAAGCTCAAGAACAATCAGCGACACCGACGCCAGTTCAACAGCCGGAGGAAGAGCATCGACGGTGCTACCGAATTTGACGTCACCGATGATGATATGAAGGAATTGAAAGCGTGCTTCGATCTCGGTTTCGGTTTTGATCCGTCTAATGATTTGGATCCGAAACTGGCGCAAGCTTTTCCCGCCCTTGAACTTTACGCTGCCGTTAACCGGCGGTACAACGGTAGATTACTGTCGAGGTCGTCGTCGTTAAGTTCTGATTCGTTGGCGAGCTCAGCTGTTCCGACGAATGCCATCATCAATATTGGTGATGATCCGACGACGGTGAAGACGAAACTGAAGCAATGGGCTCAGCTGGTTTCTTGCTTGATGCTGGAAGGTTCTTCTCAGTTCGCCATGAACAAACATGCTCTAGAGTAG 501 49.3 MADSDKQPQFLFKQHSWSPDIHRDIEWQKLKNNQRHRRQFNSRRKSIDGATEFDVTDDDMKELKACFDLGFGFDPSNDLDPKLAQAFPALELYAAVNRRYNGRLLSRSSSLSSDSLASSAVPTNAIINIGDDPTTVKTKLKQWAQLVSCLMLEGSSQFAMNKHALE 166
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00105 166 Pfam Protein of unknown function (DUF1685) 55 113 IPR012881 -
Mimi17g00105 166 PANTHER OSJNBA0071G03.3 PROTEIN 10 150 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00105 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
421428 Mimi17g00105 Mimi9g01615
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr11:14295171 Mimi17g00105 Mimi-Chr17:3123599 dispersed
Mimi Mimi-Chr14:28334369 Mimi17g00105 Mimi-Chr17:3123599 dispersed
Mimi Mimi-Chr14:28644910 Mimi17g00105 Mimi-Chr17:3123599 dispersed
Mimi Mimi-Chr17:3123599 Mimi1g02543 Mimi-Chr1:102130988 dispersed
Mimi Mimi-Chr17:3123599 Mimi17g00110 Mimi-Chr17:3181571 proximal
Mimi Mimi-Chr17:3123599 Mimi9g01615 Mimi-Chr9:60903048 wgd