Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00107 | ATGTCAGCTTTCCACGTCAAGTTCCCGGTACCCAATTCATTTCTCAATCCCATGACCGCCATGAGTTCCACCAGGCTGTATGCAACCACCGTACCGGCTCCTGTTCCGGCGCCGGAGATGACTGCAGACAGGCTGGAACCCAGGGTTGAAAAGAAAGACGGGTATTATGTGGTGAAGGAAAAGTTCCGGGCGGGTATAAATCCGCAAGAAAAGGTGAAGATTGGCGGTGAACCGATGAAGCTGTTCATGGAAAATGGGATTGAAGATCTTGCAAAGATTCCGTTTGAAGAACTGGATAAATCTAAGGATTATAAAGATGATGTTGATGTTAGACTCAAATGGCTTGGATTGTTCCATCGGAGGAAACATCAATATGGTCGGTTTATGATGAGGTTGAAGCTCCCAAATGGCATAACAACTAGTGCACAAACCCGTTTCTTAGCCAGTGTGATAAAGCAGTATGGTGAGCACGGGTGTGCTGATATTACCACACGCCAAAACTGGCAAATTCGAGTTGGAAACCCTCTTGCAGGAATCGATCCACACGAAATTGTGGACACGAGGAGGCCGTATTTGAACTTGCTATCACAATTCATCACTTCGAATTCTCGAGGGAATCCTGAATTTACAAACTTAGGGAATAGGCAAAAGACTAGAATGATGTGGTTGATTGATGAACTTGGTGTAGAAGGTTTTCGATCAGAAGTGGTAAAGAGAATGCCGAATCAAGCATTGGAGAGATCATCTAATGAGGACCTCATTGATCACAAATGGGAAAGAAGGGATTACTTTGCACGGTTAGCCGACGAGTATGGCTCAGGAGAGCTTCGACTAACCGTGGAACAAAACATCATAATCCCAAATGTACAAAACTCAAAAGTTGAAGCTTTGCTTGAGGAGTCGCTTTTAAAAGAAAAGTTCCTACCCGAGCCACCTATCTTGATGAAAGGTTAG | 954 | 44.44 | MSAFHVKFPVPNSFLNPMTAMSSTRLYATTVPAPVPAPEMTADRLEPRVEKKDGYYVVKEKFRAGINPQEKVKIGGEPMKLFMENGIEDLAKIPFEELDKSKDYKDDVDVRLKWLGLFHRRKHQYGRFMMRLKLPNGITTSAQTRFLASVIKQYGEHGCADITTRQNWQIRVGNPLAGIDPHEIVDTRRPYLNLLSQFITSNSRGNPEFTNLGNRQKTRMMWLIDELGVEGFRSEVVKRMPNQALERSSNEDLIDHKWERRDYFARLADEYGSGELRLTVEQNIIIPNVQNSKVEALLEESLLKEKFLPEPPILMKG | 317 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00107 | 317 | Gene3D | - | 44 | 197 | - | - | |
| Mimi17g00107 | 317 | SUPERFAMILY | Nitrite-Sulfite reductase N-terminal domain-like | 45 | 171 | IPR036136 | GO:0016491(InterPro) | |
| Mimi17g00107 | 317 | Gene3D | Sulfite Reductase Hemoprotein;Domain 2 | 259 | 308 | - | - | |
| Mimi17g00107 | 317 | Pfam | Nitrite-Sulfite reductase ferredoxin-like half domain | 264 | 300 | IPR005117 | GO:0016491(InterPro) | |
| Mimi17g00107 | 317 | Pfam | Nitrite-Sulfite reductase ferredoxin-like half domain | 121 | 171 | IPR005117 | GO:0016491(InterPro) | |
| Mimi17g00107 | 317 | PANTHER | FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC | 264 | 317 | IPR051329 | - | |
| Mimi17g00107 | 317 | SUPERFAMILY | Nitrite-Sulfite reductase N-terminal domain-like | 221 | 300 | IPR036136 | GO:0016491(InterPro) | |
| Mimi17g00107 | 317 | Gene3D | Sulfite Reductase Hemoprotein, domain 1 | 212 | 258 | IPR045854 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00107 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 421429 | Mimi17g00107 | Mimi9g01610 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:3154907 | Mimi17g00111 | Mimi-Chr17:3197799 | proximal | |
| Mimi | Mimi-Chr17:3154907 | Mimi9g01610 | Mimi-Chr9:60810346 | wgd |