AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00123 ATGGAGAGAGCACTCATGATTCCCTGGTCTCCGATCACCACCGACACCACCTCCTACGCCACCGCACCTAACCGCTTTTACAGCGTACCCACCAGCCCGACTGACGACGACGACTACGACTTTGCATTCGACTTCAGCGGACAGCTGCAACCCCCGTCTGTCTCCGATGCAGACGAGCTCTTCTATTGCGGCAAAATCAAGACATTAAAGCTTACAGATTATGATCAAACTAACTCCCCCACATCAAGATTCACACAAGCATTTTCTCCTCCATATGGCGATCAAAAGCAAACCATTGATCAAAACCCACCCAAACGAGGACGGGAAACAACCACCAGCACCACAAGAACAAGGGACAAAGTATCCCGATCATCATCTCCGTTCAGAATCTCCGATATTTTATCAGAACAAGATAACACTCAGAAAGATTCGCTAACTTGGTACAACAAATGGAACCTGAAGAACCTGCTACTGTTTCGCAGCACATCGGAAGGGAGTGCTCGACGGAGGAAAGACCCGGTGAATAAATACAGCAGGATAAGAGATGAAGATGTTAAGAATTTAAGCTTTAGAAGCACCAATAGTTGCAGTTCCGGCGTGGGGTCGAGTCGCCGGAAGGTATCGGCGCATGAAAAGCATTACACCACGAACCGGGCAGTGGCGGAGGAGATGCGGCGAAAGACATACTTGCCGTACAAGTCAGGGTTGTTGGGTTGCCTGGGGTTTCATAACAATGGCGCCGGTGGTAGTGTTCAGGAGATTTCAAAAGGAATTACTTCCGTCACAAGACAACGACAAGTTTAG 804 48.88 MERALMIPWSPITTDTTSYATAPNRFYSVPTSPTDDDDYDFAFDFSGQLQPPSVSDADELFYCGKIKTLKLTDYDQTNSPTSRFTQAFSPPYGDQKQTIDQNPPKRGRETTTSTTRTRDKVSRSSSPFRISDILSEQDNTQKDSLTWYNKWNLKNLLLFRSTSEGSARRRKDPVNKYSRIRDEDVKNLSFRSTNSCSSGVGSSRRKVSAHEKHYTTNRAVAEEMRRKTYLPYKSGLLGCLGFHNNGAGGSVQEISKGITSVTRQRQV 267
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00123 267 MobiDBLite consensus disorder prediction 79 127 - -
Mimi17g00123 267 MobiDBLite consensus disorder prediction 191 211 - -
Mimi17g00123 267 Pfam Protein of unknown function (DUF1645) 57 231 IPR012442 -
Mimi17g00123 267 MobiDBLite consensus disorder prediction 79 110 - -
Mimi17g00123 267 PANTHER OS07G0619500 PROTEIN 23 244 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00123 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
129733 Mimi17g00123 Mimi3g00916
421434 Mimi17g00123 Mimi9g01597
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr12:78105458 Mimi17g00123 Mimi-Chr17:3523655 dispersed
Mimi Mimi-Chr17:3523655 Mimi18g01979 Mimi-Chr18:86869067 dispersed
Mimi Mimi-Chr14:24483083 Mimi17g00123 Mimi-Chr17:3523655 transposed
Mimi Mimi-Chr14:24861371 Mimi17g00123 Mimi-Chr17:3523655 transposed
Mimi Mimi-Chr14:34614198 Mimi17g00123 Mimi-Chr17:3523655 transposed
Mimi Mimi-Chr17:3523655 Mimi3g00916 Mimi-Chr3:17260895 wgd
Mimi Mimi-Chr17:3523655 Mimi9g01597 Mimi-Chr9:60162232 wgd