Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mimi17g00126 | ATGACATTCAACCTAACTGTGAACCCTGATAGATCAATAATCATAAACAAAGCAACCGAAGCACATGAAAGCTCATCATCAACCACTCTCTTCTCTTTACCAGCCCCAACAGAAAAGGTAAACCTAACACCATCAACACCAAACCCAAAACCCCCAGCTACAGAACGAGGATCAAATGAACCACCAGGTTTGTTGGATGTTTTGATTGCAATGTGTCGTGTGGAGGGATCTGGAAATGCTGCGATTGCTACGAGAAACGGAGGTATAGAGTTGATGTGTTCTGTTTGCTCCAAACTTAGCAGTGGAGGTCGTCATTCAGCACTTGTATTGGCTTTAGAGGCATTGGCTGCATTTCTTCATGATCTTCAAAGTACAGAAAGTTTTAGGCTAAGTGGAGGGCCAAAAATATTGATCAAGATTCTAACCAATGAAACTCAAAATGTGAATATCTTGAACAGTGGTTTTTCAGTTGTTGCTGCTGCTTCAACTGGTAATGAGGTTCTTAAAGAATCTTTTGTGGAATTACACATAGATGAATTAATGGTTACGATCATGAAGAAATATAACAAAGGGAGCATTCCCTGTTTATATGATGCTATTAGAGTTCTTTTGACTGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAATTGGAATTGCTGAGGCCCTTGTTGAGTCATTGGAGGGTGGCATTAGCTCACCATGTCTTGTATCAGCAACTATTGCATTAAAAGCCGTTGCAGTGAATGATGAAATATGCCGTTCTGTTGCTGAAAACGGTGGCATAGATTACTTGCTCATTTGTATTGATGAATGCGGCGTACAAGGGAACAAAATTGTGGCTAAAGCTTGTTGCTCCTTACTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATTGTTGAGAGGGGAGGATTGAATAGACTCATCACACTTTCTAGCAGACTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATCCAATCGATGCAAAAGTTCCCTCACTCACATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCTAGGAATCCCGAAAACAGGCCTATATTATTGAGTAATGGTATTGAGAAGATAATAAGAAATGCCAAGGAAAGCCACAAAAGCTGTAGAGACGCGGCCACTGCTGCTCTTAGAGACTTGGGGCTTGGAAACTACAATTCTTAG | 1308 | 41.67 | MTFNLTVNPDRSIIINKATEAHESSSSTTLFSLPAPTEKVNLTPSTPNPKPPATERGSNEPPGLLDVLIAMCRVEGSGNAAIATRNGGIELMCSVCSKLSSGGRHSALVLALEALAAFLHDLQSTESFRLSGGPKILIKILTNETQNVNILNSGFSVVAAASTGNEVLKESFVELHIDELMVTIMKKYNKGSIPCLYDAIRVLLTADDNRVVASQVYGYARQFAKIGIAEALVESLEGGISSPCLVSATIALKAVAVNDEICRSVAENGGIDYLLICIDECGVQGNKIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSHQLQKNSCLMIRNLVARNPENRPILLSNGIEKIIRNAKESHKSCRDAATAALRDLGLGNYNS | 435 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mimi17g00126 | 435 | Gene3D | - | 64 | 435 | IPR011989 | - | |
| Mimi17g00126 | 435 | PANTHER | UNCHARACTERIZED | 74 | 429 | - | - | |
| Mimi17g00126 | 435 | MobiDBLite | consensus disorder prediction | 25 | 44 | - | - | |
| Mimi17g00126 | 435 | MobiDBLite | consensus disorder prediction | 25 | 61 | - | - | |
| Mimi17g00126 | 435 | SUPERFAMILY | ARM repeat | 76 | 422 | IPR016024 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mimi17g00126 | K24166 | armadillo repeat-containing protein 6 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Mimi | Mimi-Chr17:3608213 | Mimi1g03394 | Mimi-Chr1:116399536 | dispersed | |
| Mimi | Mimi-Chr17:3608213 | Mimi11g00161 | Mimi-Chr11:8337939 | transposed |