AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mimi17g00126 ATGACATTCAACCTAACTGTGAACCCTGATAGATCAATAATCATAAACAAAGCAACCGAAGCACATGAAAGCTCATCATCAACCACTCTCTTCTCTTTACCAGCCCCAACAGAAAAGGTAAACCTAACACCATCAACACCAAACCCAAAACCCCCAGCTACAGAACGAGGATCAAATGAACCACCAGGTTTGTTGGATGTTTTGATTGCAATGTGTCGTGTGGAGGGATCTGGAAATGCTGCGATTGCTACGAGAAACGGAGGTATAGAGTTGATGTGTTCTGTTTGCTCCAAACTTAGCAGTGGAGGTCGTCATTCAGCACTTGTATTGGCTTTAGAGGCATTGGCTGCATTTCTTCATGATCTTCAAAGTACAGAAAGTTTTAGGCTAAGTGGAGGGCCAAAAATATTGATCAAGATTCTAACCAATGAAACTCAAAATGTGAATATCTTGAACAGTGGTTTTTCAGTTGTTGCTGCTGCTTCAACTGGTAATGAGGTTCTTAAAGAATCTTTTGTGGAATTACACATAGATGAATTAATGGTTACGATCATGAAGAAATATAACAAAGGGAGCATTCCCTGTTTATATGATGCTATTAGAGTTCTTTTGACTGCTGATGATAACCGAGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAATTGGAATTGCTGAGGCCCTTGTTGAGTCATTGGAGGGTGGCATTAGCTCACCATGTCTTGTATCAGCAACTATTGCATTAAAAGCCGTTGCAGTGAATGATGAAATATGCCGTTCTGTTGCTGAAAACGGTGGCATAGATTACTTGCTCATTTGTATTGATGAATGCGGCGTACAAGGGAACAAAATTGTGGCTAAAGCTTGTTGCTCCTTACTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATTGTTGAGAGGGGAGGATTGAATAGACTCATCACACTTTCTAGCAGACTTGCTGATGATCCTTCTGTCCTCCAAGAGGTGATGACTATCATATGCACCCTGTGCCTGCGATCACCTGCAAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATCCAATCGATGCAAAAGTTCCCTCACTCACATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCTAGGAATCCCGAAAACAGGCCTATATTATTGAGTAATGGTATTGAGAAGATAATAAGAAATGCCAAGGAAAGCCACAAAAGCTGTAGAGACGCGGCCACTGCTGCTCTTAGAGACTTGGGGCTTGGAAACTACAATTCTTAG 1308 41.67 MTFNLTVNPDRSIIINKATEAHESSSSTTLFSLPAPTEKVNLTPSTPNPKPPATERGSNEPPGLLDVLIAMCRVEGSGNAAIATRNGGIELMCSVCSKLSSGGRHSALVLALEALAAFLHDLQSTESFRLSGGPKILIKILTNETQNVNILNSGFSVVAAASTGNEVLKESFVELHIDELMVTIMKKYNKGSIPCLYDAIRVLLTADDNRVVASQVYGYARQFAKIGIAEALVESLEGGISSPCLVSATIALKAVAVNDEICRSVAENGGIDYLLICIDECGVQGNKIVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSHQLQKNSCLMIRNLVARNPENRPILLSNGIEKIIRNAKESHKSCRDAATAALRDLGLGNYNS 435
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mimi17g00126 435 Gene3D - 64 435 IPR011989 -
Mimi17g00126 435 PANTHER UNCHARACTERIZED 74 429 - -
Mimi17g00126 435 MobiDBLite consensus disorder prediction 25 44 - -
Mimi17g00126 435 MobiDBLite consensus disorder prediction 25 61 - -
Mimi17g00126 435 SUPERFAMILY ARM repeat 76 422 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mimi17g00126 K24166 armadillo repeat-containing protein 6
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Mimi Mimi-Chr17:3608213 Mimi1g03394 Mimi-Chr1:116399536 dispersed
Mimi Mimi-Chr17:3608213 Mimi11g00161 Mimi-Chr11:8337939 transposed