Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mimi17g00142	ATGGAGAGTCAGGTCAACCTCAAAATCGCATTTACAATCTCTTGTCTTGCCGTTGTTTCAATTTTACTGGCAAACATACTTCGGAAACAGCGAAATCGAAAACAGAATATCAGCTCTTGTTACTTGAAATCAGAAGCGAAACCGCAGCACAATTTTAAGCGTGTTTTAGCGAACAATTCGTATGCTCCATTCAAGCACCTTAAGCTCGACGAAAGTTCTTCAGATTTGCATCCGTATGAATCAGAGATCAAGGCCATGTTAGAGGAATCACGGTTAGAATTTGAGTTTTCTTGTGGAAATATGGATATGAGAATGAATGATGAGTATATTTGGGTTGATAATGAATCGAAGTTAAAGGGACTTGTTGAGGTCTTGAGTAAAGAAAGAGTGTTTGCTGTGGATACCGAACAGCATAGCTTACGATCATTCTTAGGGTTTACAGCTCTTATTCAGATTTCTACCAGAGATGAAGATTATTTGGTGGACACCATTGCTGTTCATGATAATATGGGAATTCTTGACCCTGTCTTTGCTAATCCCAATATATGCAAGGTTTTCCATGGTGCTGATAATGATGTTATATGGCTACAAAGGGATTTTCATATTTATGTTGTTAACTTATTTGACACTGCAAAGGCTTGTGATGTCTTATCAAAACCGCAGAGATCATTAGCTTACTTGCTTGAAACTTTTTGTGGGGTCACCACTAACAAGATTTACCAGCGTGAAGATTGGCGACAACGCCCACTACCAATAGATATGGTTGAATATGCTCGAATGGATGCACACTATTTGCTTTATATTGCAGATCGTCTTGTTTCCGAGCTCAAAAACCAGAAAAACGAAAATTCAGCCGGTCTTGATGACAAATTGCATTTTGTTTCCGAGGCGAGTCGGCGTTCGAATGCCTTGTGTCTGCAACTTTTCACCAAAGATTTAGAAGCTATCCCAGGGCAGTCTGCTGCTGCTTCTATTATTTCTCGCTATTTAAATGATCATGGAAATGCTACAAACAACAGTCAGTTTCAGGATCTTGTTAGACGTTTATGCTCTTGGAGGGATTTGATGGCTCGTATGCATGACGAGAGCCTTAAATATGTACTATCTGATAATGCTATTGTTTCTCTTGCTGAAAAAGTTCCATCAACTCCAACAGATATTTGTACTTCAATTTCACAAGCTGATATTGACGTAGAATTTCATAATTGCAATTCTAGCTCGCTGTTTCCATCCTCTGTGGTCTTGAGTCATTTGGATGACTTTCCTTACCTCCTAAAAAATGAGACAATTAATCTTGATGATATATTTCAACTAATTCTCAAAAAGCACCTTGGTCCAAACGGTTCTTGTCCCTTTTCACTTTATAACTATAGTCTACTCTCTAAAACCAACATCAAGTTATCAAAGAGTTCAGCTTTAAAGGAAAATGGATTTAAGTTTTCAAAACAAGTTGCACGCAACGTTTCTCGAGAGCTTTTTGTTCAGAAGTTTTCTTGCAAATCTCCAGTGTATCATAACTGTAGGATATATGCAAATGATGGAAGATTGTTATGCTACTGCGATCGAAGGAAGCTAGAATGGTATTTGCAGCGGGACCTTGCCAAACTTGTTGATGAAGACCCACTAGCCATAATGCTTCTCTTTGAGCCCAAAGGCCGTCCAGAAGATGAAGGAAATGACTTTTATATTCAAAGTAAAAAGAATATATGTGTCGGGTGTGGTGAAGGAAATCACTATTTACGGTACCGAATAATCCCTTCATGCTATAGAATACACTTTCCTGAACATTTAAAAAGCCACCGGTCTCATGATATTGTTTTAGTTTGCGTCGATTGCCATGAAAAAGCACATTCATCTGCTGAAAAGTACAAGAAGAAAGTAGCTCTAGAATTTGGGATACCATTATTTGTACATAAAGTGGTTAATTCTAAGGAGGAACACAATGTTTCTGGATCTTCAACAAGTATTATGAATCTTGGTGATGGAGGTGTGTCTCCTTTAGAGTTGAGAACGGCTGCTATGGCTCTTATAAGGCATGGCCCACGGATGCCACCTCACCGCCGTGATGAATTGAAACAGGTTGTCAAGAAATATTATGGAGGAAGAGATATATCAGAGGAAGATTTAGAAAAAGCTTTACTAGTAGGAATGAGTCCTCACGAAAAAAGACGATTACAGAAAAAAAGAGGCATATCTCTCAACAACACTTCTTCAAAGAACATTGTCTCAGAAATGGACATCAAAGGAAATAATGTGGATCCAGCAATTAACAAAAATGAAGCTTATGAGCCTGAAAACGGTTGTAATTTGGATTTTATGAGTCCATCTGAGCCGAACAGGCCGGTTCATGTGAGCTCTGATGGGGCGGTTTTTGCCACATGTAGTTCAAAATTATCGCTATTAGGGCATGGTCCACATGGGAAACAAGTAGTTGATTATTTGCTGAAGAACCATGGGGAAAATGGGATTCAGGAATTTTGTCAAAGATGGAGACAAGTATTTGTTGAAAGTATTAATCCTCGTTTTTTACCTGCGGGTTGGGATGTGGCTCACAGCGGTAGAAGAGAGTTTGGAGAATTCAGTGTATACAATCCTGCAAATAGGGCTTTTGTTGCTGCTGAGGATCAAGGTAAACAACATCCGGCTGTTGTGTAG	2655	38.95	MESQVNLKIAFTISCLAVVSILLANILRKQRNRKQNISSCYLKSEAKPQHNFKRVLANNSYAPFKHLKLDESSSDLHPYESEIKAMLEESRLEFEFSCGNMDMRMNDEYIWVDNESKLKGLVEVLSKERVFAVDTEQHSLRSFLGFTALIQISTRDEDYLVDTIAVHDNMGILDPVFANPNICKVFHGADNDVIWLQRDFHIYVVNLFDTAKACDVLSKPQRSLAYLLETFCGVTTNKIYQREDWRQRPLPIDMVEYARMDAHYLLYIADRLVSELKNQKNENSAGLDDKLHFVSEASRRSNALCLQLFTKDLEAIPGQSAAASIISRYLNDHGNATNNSQFQDLVRRLCSWRDLMARMHDESLKYVLSDNAIVSLAEKVPSTPTDICTSISQADIDVEFHNCNSSSLFPSSVVLSHLDDFPYLLKNETINLDDIFQLILKKHLGPNGSCPFSLYNYSLLSKTNIKLSKSSALKENGFKFSKQVARNVSRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLQRDLAKLVDEDPLAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSSAEKYKKKVALEFGIPLFVHKVVNSKEEHNVSGSSTSIMNLGDGGVSPLELRTAAMALIRHGPRMPPHRRDELKQVVKKYYGGRDISEEDLEKALLVGMSPHEKRRLQKKRGISLNNTSSKNIVSEMDIKGNNVDPAINKNEAYEPENGCNLDFMSPSEPNRPVHVSSDGAVFATCSSKLSLLGHGPHGKQVVDYLLKNHGENGIQEFCQRWRQVFVESINPRFLPAGWDVAHSGRREFGEFSVYNPANRAFVAAEDQGKQHPAVV	884

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mimi17g00142	884	Gene3D	HRDC domain	329	436	IPR044876	-
	Mimi17g00142	884	SUPERFAMILY	HRDC-like	329	390	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Mimi17g00142	884	ProSiteProfiles	HRDC domain profile.	339	419	IPR002121	GO:0003676(InterPro)
	Mimi17g00142	884	Pfam	3'-5' exonuclease	109	276	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Mimi17g00142	884	Pfam	HRDC domain	343	386	IPR002121	GO:0003676(InterPro)
	Mimi17g00142	884	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	30	868	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(InterPro)\|GO:0000467(PANTHER)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Mimi17g00142	884	SMART	35exoneu6	109	277	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Mimi17g00142	884	CDD	Rrp6p-like-exo	105	299	IPR049559	-
	Mimi17g00142	884	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	46	315	-	-
	Mimi17g00142	884	SUPERFAMILY	Ribonuclease H-like	47	279	IPR012337	-
	Mimi17g00142	884	Gene3D	-	25	314	IPR036397	GO:0003676(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mimi17g00142	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Mimi	Mimi-Chr17:4019988	Mimi15g00205	Mimi-Chr15:25225219	dispersed
	Mimi	Mimi-Chr17:4019988	Mimi6g01384	Mimi-Chr6:57648659	transposed
	Mimi	Mimi-Chr17:4019988	Mimi6g01564	Mimi-Chr6:61373961	transposed